Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   E3C75_RS08230 Genome accession   NZ_CP038020
Coordinates   1553453..1553935 (-) Length   160 a.a.
NCBI ID   WP_011226072.1    Uniprot ID   Q5M461
Organism   Streptococcus thermophilus strain ATCC 19258     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1548453..1558935
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3C75_RS08210 pepT 1548935..1550158 (-) 1224 WP_084830662.1 peptidase T -
  E3C75_RS08215 lepB 1550365..1550922 (-) 558 WP_100262463.1 signal peptidase I -
  E3C75_RS08220 - 1551045..1552274 (-) 1230 WP_064355902.1 tetratricopeptide repeat protein -
  E3C75_RS08225 - 1552264..1553442 (-) 1179 WP_023909688.1 AI-2E family transporter -
  E3C75_RS08230 mutX 1553453..1553935 (-) 483 WP_011226072.1 8-oxo-dGTP diphosphatase Machinery gene
  E3C75_RS08235 ftsX 1554091..1555020 (-) 930 WP_084828856.1 permease-like cell division protein FtsX -
  E3C75_RS08240 ftsE 1555013..1555705 (-) 693 WP_084829221.1 cell division ATP-binding protein FtsE -
  E3C75_RS08250 queG 1556944..1558062 (-) 1119 WP_002953100.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18869.36 Da        Isoelectric Point: 4.7200

>NTDB_id=309250 E3C75_RS08230 WP_011226072.1 1553453..1553935(-) (mutX) [Streptococcus thermophilus strain ATCC 19258]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=309250 E3C75_RS08230 WP_011226072.1 1553453..1553935(-) (mutX) [Streptococcus thermophilus strain ATCC 19258]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTTGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5M461

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706

Multiple sequence alignment