Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   DZC75_RS01520 Genome accession   NZ_CP031641
Coordinates   360771..361172 (+) Length   133 a.a.
NCBI ID   WP_029614259.1    Uniprot ID   A0AAI8K632
Organism   Pseudomonas parafulva strain JBCS1880     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 355771..366172
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DZC75_RS01490 (DZC75_01490) - 355922..356926 (-) 1005 WP_029614263.1 aspartate carbamoyltransferase catalytic subunit -
  DZC75_RS01495 (DZC75_01495) pyrR 356939..357457 (-) 519 WP_039582744.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  DZC75_RS01500 (DZC75_01500) ruvX 357504..357929 (-) 426 WP_116887414.1 Holliday junction resolvase RuvX -
  DZC75_RS01505 (DZC75_01505) - 357929..358498 (-) 570 WP_039582746.1 YqgE/AlgH family protein -
  DZC75_RS01510 (DZC75_01510) - 358560..359459 (-) 900 WP_039582747.1 energy transducer TonB -
  DZC75_RS01515 (DZC75_01515) gshB 359580..360536 (-) 957 WP_029614260.1 glutathione synthase -
  DZC75_RS01520 (DZC75_01520) pilG 360771..361172 (+) 402 WP_029614259.1 response regulator Regulator
  DZC75_RS01525 (DZC75_01525) pilH 361219..361584 (+) 366 WP_029614258.1 twitching motility response regulator PilH -
  DZC75_RS01530 (DZC75_01530) - 361581..362135 (+) 555 WP_116887415.1 chemotaxis protein CheW -
  DZC75_RS01535 (DZC75_01535) - 362200..364221 (+) 2022 WP_116890006.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14745.09 Da        Isoelectric Point: 6.7512

>NTDB_id=309247 DZC75_RS01520 WP_029614259.1 360771..361172(+) (pilG) [Pseudomonas parafulva strain JBCS1880]
MEQPLKVMVIDDSRTIRRTAQTLLGEVGCEVITASDGFDALAKIVDHAPRIIFVDVLMPRLDGYQTCAIIKHNALFKDTP
VVLLSSRDGLFDKARGRVVGSDQFLTKPFTKEELLEAIRVHVPGFAEHAHHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=309247 DZC75_RS01520 WP_029614259.1 360771..361172(+) (pilG) [Pseudomonas parafulva strain JBCS1880]
ATGGAACAACCTCTGAAGGTGATGGTGATCGACGACTCGCGCACCATCCGCCGGACCGCCCAGACGCTGCTGGGGGAGGT
GGGTTGCGAGGTGATCACCGCCAGCGACGGTTTCGATGCCCTGGCCAAGATCGTCGATCATGCGCCGCGGATCATCTTCG
TCGATGTGCTGATGCCGCGCCTGGACGGCTACCAGACCTGCGCGATCATCAAGCACAACGCGCTGTTCAAGGACACCCCG
GTGGTGTTGCTGTCCTCGCGCGATGGCCTGTTCGACAAGGCCCGTGGGCGGGTGGTCGGCTCCGACCAATTCCTGACCAA
ACCGTTCACCAAGGAAGAATTGCTCGAAGCGATCCGCGTGCATGTGCCCGGATTCGCCGAACATGCACACCACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

68.033

91.729

0.624

Multiple sequence alignment