Detailed information NTG0030924

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPSH_RS07390
• Genome accession: NC_010698
• Coordinates: 1525582..1527021 (-)
• Length: 479 a.a.
• NCBI ID: WP_000751645.1
• Uniprot ID: -
• Organism: Helicobacter pylori Shi470
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1520582..1532021

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPSH_RS07365 (HPSH_07820)	recG	1521719..1523590 (-)	1872	WP_001158379.1	ATP-dependent DNA helicase RecG	-
HPSH_RS07370 (HPSH_07825)	-	1523672..1524016 (+)	345	WP_000837011.1	hypothetical protein	-
HPSH_RS07375 (HPSH_07830)	-	1524020..1524655 (+)	636	WP_000668049.1	outer membrane protein	-
HPSH_RS07380 (HPSH_07835)	-	1524652..1525404 (-)	753	WP_000780314.1	exodeoxyribonuclease III	-
HPSH_RS07390 (HPSH_07840)	comH	1525582..1527021 (-)	1440	WP_000751645.1	hypothetical protein	Machinery gene
HPSH_RS07400 (HPSH_07855)	dnaA	1527250..1528617 (-)	1368	WP_000380595.1	chromosomal replication initiator protein DnaA	-
HPSH_RS07405 (HPSH_07860)	-	1528770..1529312 (+)	543	WP_000922950.1	purine-nucleoside phosphorylase	-
HPSH_RS07410 (HPSH_07865)	-	1529348..1529587 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HPSH_RS07415 (HPSH_07870)	glmS	1529588..1531381 (+)	1794	WP_000334330.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54984.01 Da
• Isoelectric Point: 6.9525

>NTDB_id=30924 HPSH_RS07390 WP_000751645.1 1525582..1527021(-) (comH) [Helicobacter pylori Shi470]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPREVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLSPNRPTIPRNTQIVFSSKELKELHPHQMPSLNAPIQKPQNKPTPSQQSLQNFSYPESKLDSKNPKNSLLQPL
ATLNKTSLANEVKTPTNDTKPPLKHSSQDQENNLFVTPPTEKTLPNNTPNADINEHNESNENRDNAQKQAVRDPNIKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVQKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQIEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=30924 HPSH_RS07390 WP_000751645.1 1525582..1527021(-) (comH) [Helicobacter pylori Shi470]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCACATAAAGGCACTTTTAAAGCTAAAGTCCTTGATTCTAAAGAACCAAGAGAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAGCCCTAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGCTACACCCGCACCAAATGCCTTCTTTAAACGCGCCCATACAAAAACCACAAAACAAACCCACTCCATCGC
AACAATCTCTTCAAAACTTTTCTTACCCAGAGTCCAAACTAGACTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTA
GCCACTCTTAATAAAACAAGCCTTGCTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
ACAAGATCAAGAAAACAACCTCTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATATTA
ACGAACACAATGAAAGCAATGAGAATAGGGATAATGCGCAAAAACAAGCCGTTAGAGATCCTAATATCAAAGAATTTGCG
TGCGGGAAGTGGGTCTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCAACAGACATTACCCCTTGCGACTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCTGTTCAAAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCCAGAGCACGAAAAGACGGCACGACTAGGCAATGTTATCTGATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATC
AAATAGAGCCGACTTTCTATGAAACTAGCGAACTAGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTG
AATTTGAATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	91.649	100	0.916