Detailed information NTG0308638

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: E1J55_RS22940
• Genome accession: NZ_CP037903
• Coordinates: 4741375..4742895 (+)
• Length: 506 a.a.
• NCBI ID: WP_000059000.1
• Uniprot ID: -
• Organism: Escherichia coli strain LHM10-1
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 4736375..4747895

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E1J55_RS22915	ilvE	4737929..4738858 (-)	930	WP_136698636.1	branched-chain-amino-acid transaminase	-
E1J55_RS22920	ilvM	4738878..4739141 (-)	264	WP_000983255.1	acetolactate synthase 2 small subunit	-
E1J55_RS22925	ilvG	4739138..4740784 (-)	1647	WP_001012614.1	acetolactate synthase 2 catalytic subunit	-
E1J55_RS22930	ilvX	4740787..4740837 (-)	51	WP_001387183.1	peptide IlvX	-
E1J55_RS22935	ilvL	4740924..4741022 (-)	99	WP_001311244.1	ilv operon leader peptide	-
E1J55_RS22940	comM	4741375..4742895 (+)	1521	WP_000059000.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
E1J55_RS22945	maoP	4742920..4743258 (-)	339	WP_000841001.1	macrodomain Ori organization protein MaoP	-
E1J55_RS22950	hdfR	4743377..4744216 (+)	840	WP_000379235.1	HTH-type transcriptional regulator HdfR	-

Sequence

Protein

• Length: 506 a.a.
• Molecular weight: 55139.32 Da
• Isoelectric Point: 7.6004

>NTDB_id=308638 E1J55_RS22940 WP_000059000.1 4741375..4742895(+) (comM) [Escherichia coli strain LHM10-1]
MSLSIVHTRAALGVNAPPITVEVHISKGLPGLTMVGLPETTVKEARDRVRSAIINSGYEYPAKKITINLAPADLPKEGGR
YDLPIAIALLAASEQLTANKLDEYELVGELALTGALRGVPGAISSATEALKSGRKIIVAKDNEDEVGLINGEGCLIADHL
QAVCAFLEGKNTLERPKPTDAVSRALQHDLSDVVGQEQGKRGLEITAAGGHNLLLIGPPGTGKTMLASRINGLLPDLSNE
EALESAAILSLVNAESVQKQWRQRPFRSPHHSASLTAMVGGGAIPGPGEISLAHNGVLFLDELPEFERRTLDALREPIES
GQIHLSRTRAKITYPARFQLVAAMNPSPTGHYQGNHNRCTPEQTLRYLNRLSGPFLDRFDLSLEIPLPPPGILSKTVVPG
ESSATVKQRVMAARERQFKRQNKLNAWLDSPEIRQFCKLESEDAMWLEGTLIHLGLSIRAWQRLLKVARTIADIDQSDII
TRQHLQEAVSYRAIDRLLIHLQKLLT

Nucleotide

• Length: 1521 bp

>NTDB_id=308638 E1J55_RS22940 WP_000059000.1 4741375..4742895(+) (comM) [Escherichia coli strain LHM10-1]
ATGTCACTGTCAATTGTTCATACCCGCGCAGCCCTGGGAGTAAATGCGCCCCCGATCACTGTTGAGGTACATATCAGTAA
AGGTCTACCCGGCTTAACGATGGTGGGCTTACCAGAAACAACTGTAAAAGAAGCTCGCGATCGCGTGCGCAGCGCCATTA
TCAATAGCGGATATGAATATCCGGCGAAAAAAATCACCATCAACCTTGCTCCAGCCGATCTGCCAAAAGAAGGGGGACGA
TATGATTTACCTATCGCCATTGCGTTGCTGGCGGCCTCAGAACAGCTTACAGCCAATAAGTTAGATGAATATGAATTAGT
CGGAGAACTGGCTCTTACAGGCGCTCTGCGTGGCGTTCCCGGTGCAATCTCCAGTGCAACTGAAGCTCTTAAGTCGGGCA
GAAAAATTATCGTCGCGAAAGATAACGAAGATGAAGTGGGGCTAATTAACGGTGAAGGATGCCTGATAGCCGATCATCTG
CAGGCTGTCTGTGCGTTTCTGGAAGGTAAGAACACTCTCGAACGCCCGAAACCAACTGATGCAGTATCCCGGGCGCTACA
ACATGATCTCAGTGATGTTGTCGGTCAGGAGCAAGGAAAACGAGGACTGGAAATTACCGCCGCTGGTGGGCACAACCTTT
TACTGATTGGACCGCCGGGAACAGGTAAAACAATGCTCGCCAGCCGTATTAATGGCCTTTTGCCAGATTTAAGCAATGAA
GAGGCACTGGAGAGCGCTGCGATATTAAGTCTGGTAAATGCTGAATCAGTACAAAAACAATGGCGGCAGCGCCCGTTCCG
CTCACCGCATCACAGTGCGTCGTTAACTGCGATGGTGGGCGGTGGTGCAATTCCAGGGCCAGGTGAAATTTCGTTGGCGC
ATAACGGCGTGCTTTTTCTTGATGAGCTACCTGAATTTGAACGGCGTACACTGGATGCCTTGCGAGAGCCGATTGAATCC
GGGCAGATCCATCTTTCACGCACACGAGCAAAAATAACCTATCCAGCCCGTTTCCAGCTTGTCGCGGCGATGAATCCCAG
CCCTACCGGACATTATCAGGGAAACCATAACCGCTGCACGCCAGAACAGACATTACGTTATCTCAACCGGCTCTCGGGGC
CCTTTCTCGACCGCTTCGATCTCTCACTGGAGATCCCATTACCACCCCCCGGCATTTTGAGTAAAACGGTAGTGCCGGGA
GAAAGCAGCGCCACCGTTAAACAACGCGTAATGGCCGCCAGAGAGCGCCAATTTAAGCGGCAGAATAAACTGAATGCCTG
GCTGGATAGTCCGGAAATACGCCAATTCTGCAAACTTGAGAGCGAAGATGCGATGTGGTTGGAAGGAACACTGATCCATC
TGGGGTTATCGATTCGTGCCTGGCAGCGGTTATTGAAAGTTGCACGAACCATTGCTGATATTGATCAGTCTGACATTATC
ACACGTCAGCATTTGCAGGAGGCAGTTAGCTATCGTGCGATTGACCGTTTGCTCATCCATCTGCAAAAACTACTGACATA
A

Domains

Predicted by InterProScan.

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (400-492)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (189-386)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	58.708	100	0.593
comM	Vibrio cholerae O1 biovar El Tor strain E7946	59.562	99.209	0.591
comM	Vibrio cholerae strain A1552	59.562	99.209	0.591
comM	Glaesserella parasuis strain SC1401	58.58	100	0.587
comM	Vibrio campbellii strain DS40M4	57.937	99.605	0.577
comM	Acinetobacter baylyi ADP1	49.197	98.419	0.484
comM	Legionella pneumophila str. Paris	47.992	98.419	0.472
comM	Legionella pneumophila strain ERS1305867	47.992	98.419	0.472
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	44.269	100	0.443