Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   EZV63_RS26660 Genome accession   NZ_CP036534
Coordinates   5962346..5963125 (-) Length   259 a.a.
NCBI ID   WP_031035398.1    Uniprot ID   A0ABS7WDF7
Organism   Streptomyces sp. VN1     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 5957346..5968125
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EZV63_RS26650 (EZV63_27025) - 5959313..5959945 (+) 633 WP_051159809.1 GNAT family N-acetyltransferase -
  EZV63_RS26655 (EZV63_27030) - 5960181..5962157 (+) 1977 WP_031035400.1 ATP-dependent DNA helicase -
  EZV63_RS26660 (EZV63_27035) dinR/lexA 5962346..5963125 (-) 780 WP_031035398.1 transcriptional repressor LexA Regulator
  EZV63_RS26665 (EZV63_27040) nrdR 5963789..5964352 (+) 564 WP_031035396.1 transcriptional regulator NrdR -
  EZV63_RS26670 (EZV63_27045) - 5964521..5967424 (+) 2904 WP_031035394.1 vitamin B12-dependent ribonucleotide reductase -
  EZV63_RS26675 (EZV63_27050) - 5967553..5968086 (-) 534 WP_031035392.1 TerD family protein -

Sequence

Protein


Download         Length: 259 a.a.        Molecular weight: 27940.69 Da        Isoelectric Point: 7.0665

>NTDB_id=308382 EZV63_RS26660 WP_031035398.1 5962346..5963125(-) (dinR/lexA) [Streptomyces sp. VN1]
MTTTADSAIITAQDRPQGRPEPVHAMSDAANPEGHKRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSMREI
GQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQAASVQPTDTAGKPAASYVPLVGRIAAGGPILAEESVED
VFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHNAAYEP
IPGDDATILGKVVAVLRRV

Nucleotide


Download         Length: 780 bp        

>NTDB_id=308382 EZV63_RS26660 WP_031035398.1 5962346..5963125(-) (dinR/lexA) [Streptomyces sp. VN1]
GTGACCACCACCGCCGACAGTGCCATCATCACTGCCCAGGACCGCCCCCAGGGCCGACCTGAGCCGGTGCACGCGATGAG
CGACGCCGCGAACCCGGAGGGGCACAAGCGCTCCCTGCCGGGCCGACCTCCGGGCATCCGGGCGGACAGCTCCGGGCTGA
CCGACCGCCAGCGCCGGGTGATCGAGGTCATCCGCGACTCGGTGCAGCGGCGTGGATACCCGCCGTCGATGCGGGAGATC
GGGCAGGCCGTCGGCCTCTCCAGCACCTCCTCCGTCGCGCACCAGCTGATGGCGCTGGAGCGCAAGGGCTTCCTGCGCCG
CGACCCGCACCGCCCGCGCGCCTACGAGGTGCGCGGCTCCGACCAGGCCGCCTCGGTGCAGCCGACGGACACCGCCGGCA
AGCCCGCCGCGTCGTACGTCCCGCTCGTCGGGCGCATCGCCGCCGGTGGCCCGATCCTCGCCGAGGAGTCCGTCGAAGAC
GTCTTCCCGCTTCCCCGGCAGCTGGTCGGCGACGGCGAGCTGTTCGTGCTGAAGGTCGTCGGCGACTCGATGATCGAGGC
CGCGATCTGCGACGGCGACTGGGTCACGGTCCGCCGCCAGCCGGTCGCCGAGAACGGCGACATCGTGGCGGCCATGCTCG
ACGGCGAGGCCACCGTCAAGCGCTTCAAGCGCGAGGACGGCCACGTCTGGCTCCTCCCGCACAACGCGGCGTACGAGCCG
ATCCCCGGTGACGACGCGACCATCCTCGGCAAGGTGGTAGCCGTACTGCGCCGCGTCTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(141-253)

LexA DNA binding domain (LexA_DNA_bind)

(51-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

45.972

81.467

0.375

Multiple sequence alignment