Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DZV55_RS07400 Genome accession   NZ_CP031623
Coordinates   1452934..1453743 (-) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain MGAS28669     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1447934..1458743
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DZV55_RS07390 (DZV55_07390) smc 1448269..1451808 (-) 3540 WP_021341213.1 chromosome segregation protein SMC -
  DZV55_RS07395 (DZV55_07395) rnc 1451809..1452501 (-) 693 WP_011284596.1 ribonuclease III -
  DZV55_RS07400 (DZV55_07400) vicX 1452934..1453743 (-) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  DZV55_RS07405 (DZV55_07405) vicK 1453747..1455099 (-) 1353 WP_002995609.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DZV55_RS07410 (DZV55_07410) vicR 1455092..1455802 (-) 711 WP_002985645.1 response regulator YycF Regulator
  DZV55_RS07415 (DZV55_07415) - 1455964..1456998 (-) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  DZV55_RS07420 (DZV55_07420) - 1457054..1458301 (-) 1248 WP_011284594.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=308324 DZV55_RS07400 WP_002985641.1 1452934..1453743(-) (vicX) [Streptococcus pyogenes strain MGAS28669]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=308324 DZV55_RS07400 WP_002985641.1 1452934..1453743(-) (vicX) [Streptococcus pyogenes strain MGAS28669]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment