Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   DZY54_RS09250 Genome accession   NZ_CP031620
Coordinates   1839071..1839847 (+) Length   258 a.a.
NCBI ID   WP_021340715.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain MGAS29064     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1834071..1844847
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DZY54_RS09230 (DZY54_09220) - 1835898..1836672 (-) 775 Protein_1717 IS30 family transposase -
  DZY54_RS09240 (DZY54_09230) rlmH 1837068..1837547 (-) 480 WP_002981964.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  DZY54_RS09245 (DZY54_09235) htrA 1837759..1838982 (+) 1224 WP_011285340.1 trypsin-like peptidase domain-containing protein Regulator
  DZY54_RS09250 (DZY54_09240) spo0J 1839071..1839847 (+) 777 WP_021340715.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 258 a.a.        Molecular weight: 29027.83 Da        Isoelectric Point: 10.2588

>NTDB_id=308178 DZY54_RS09250 WP_021340715.1 1839071..1839847(+) (spo0J) [Streptococcus pyogenes strain MGAS29064]
MTKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAGERRLKASKMAGLKKVPAII
KKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMTHDEIAKYMGKSRPYISNTLRLLQLPAPIIKAIEEGKISA
GHARALLTLSDDKQQLYLTHKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHSGYL
QISFSNDDELNRIINKLL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=308178 DZY54_RS09250 WP_021340715.1 1839071..1839847(+) (spo0J) [Streptococcus pyogenes strain MGAS29064]
ATGACAAAAGAATTATTGATAGACCTACCAATTGAAGATATTGTTACAAATCCCTATCAACCAAGGATACAATTTAATCA
AAGAGAACTCCAAGACCTAGCAACTTCTATTAAATCAAACGGCCTCATTCAACCTATTATTGTTCGAAAATCTGACATTT
TTGGCTATGAGTTAGTTGCTGGAGAACGACGACTTAAAGCTTCAAAAATGGCTGGTCTAAAAAAAGTTCCAGCTATCATC
AAGAAGATCTCTACACTCGAGAGTATGCAACAAGCTATAGTTGAAAATTTACAACGTTCTAACCTTAACGCTATCGAAGA
AGCTAAAGCCTATCAGTTATTGGTTGAAAAAAAACACATGACTCACGATGAGATTGCTAAATATATGGGAAAATCAAGAC
CTTATATTAGCAATACCTTACGTCTGTTACAACTCCCAGCACCTATCATTAAAGCAATTGAAGAAGGAAAAATTAGTGCG
GGACACGCGCGTGCTCTTTTAACTTTGAGTGATGATAAGCAACAACTGTACCTCACTCATAAAATACAAAATGAAGGCCT
AAGTGTTAGGCAAATTGAGCAACTGGTTACTTCTACTCCAAGTTCGAAGCTATCTAAAAAAACTAAAAATATTTTTGCCA
CTTCTTTAGAGAAACAATTGGCTAAATCATTGGGACTCTCTGTCAATATGAAGCTGACAGCAAACCATAGTGGGTACCTT
CAGATATCTTTTTCCAATGATGATGAATTAAACAGAATTATCAACAAGCTACTTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.755

99.612

0.585


Multiple sequence alignment