Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | EZZ78_RS26905 | Genome accession | NZ_CP036492 |
| Coordinates | 5827060..5827425 (-) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain Paer4 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 5822060..5832425
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EZZ78_RS26890 (EZZ78_27495) | pilK | 5823404..5824279 (-) | 876 | WP_003100938.1 | type 4 fimbrial methyltransferase PilK | - |
| EZZ78_RS26895 (EZZ78_27500) | pilJ | 5824340..5826388 (-) | 2049 | WP_003100940.1 | chemotaxis chemoreceptor PilJ | - |
| EZZ78_RS26900 (EZZ78_27505) | - | 5826473..5827009 (-) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| EZZ78_RS26905 (EZZ78_27510) | pilH | 5827060..5827425 (-) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| EZZ78_RS26910 (EZZ78_27515) | pilG | 5827472..5827879 (-) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| EZZ78_RS26915 (EZZ78_27520) | gshB | 5828134..5829087 (+) | 954 | WP_003100943.1 | glutathione synthase | - |
| EZZ78_RS26920 (EZZ78_27525) | - | 5829234..5830127 (+) | 894 | WP_003114892.1 | energy transducer TonB | - |
| EZZ78_RS26925 (EZZ78_27530) | - | 5830176..5830745 (+) | 570 | WP_003100947.1 | YqgE/AlgH family protein | - |
| EZZ78_RS26930 (EZZ78_27535) | ruvX | 5830745..5831179 (+) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| EZZ78_RS26935 (EZZ78_27540) | pyrR | 5831291..5831803 (+) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=308038 EZZ78_RS26905 WP_003084587.1 5827060..5827425(-) (pilH) [Pseudomonas aeruginosa strain Paer4]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=308038 EZZ78_RS26905 WP_003084587.1 5827060..5827425(-) (pilH) [Pseudomonas aeruginosa strain Paer4]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |