Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DZ187_RS07320 Genome accession   NZ_CP031617
Coordinates   1441912..1442721 (-) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain MGAS29409     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1436912..1447721
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DZ187_RS07310 (DZ187_07300) smc 1437247..1440786 (-) 3540 WP_011284597.1 chromosome segregation protein SMC -
  DZ187_RS07315 (DZ187_07305) rnc 1440787..1441479 (-) 693 WP_011284596.1 ribonuclease III -
  DZ187_RS07320 (DZ187_07310) vicX 1441912..1442721 (-) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  DZ187_RS07325 (DZ187_07315) vicK 1442725..1444077 (-) 1353 WP_002995609.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DZ187_RS07330 (DZ187_07320) vicR 1444070..1444780 (-) 711 WP_002985645.1 response regulator YycF Regulator
  DZ187_RS07335 (DZ187_07325) - 1444942..1445976 (-) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  DZ187_RS07340 (DZ187_07330) - 1446032..1447279 (-) 1248 WP_011284594.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=308005 DZ187_RS07320 WP_002985641.1 1441912..1442721(-) (vicX) [Streptococcus pyogenes strain MGAS29409]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=308005 DZ187_RS07320 WP_002985641.1 1441912..1442721(-) (vicX) [Streptococcus pyogenes strain MGAS29409]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment