Detailed information    

insolico Bioinformatically predicted

Overview

Name   Cj0683   Type   Machinery gene
Locus tag   A2J15_RS03275 Genome accession   NZ_CP031611
Coordinates   666799..667233 (-) Length   144 a.a.
NCBI ID   WP_066776745.1    Uniprot ID   A0A424Z019
Organism   Campylobacter hepaticus strain HV10     
Function   initialization of DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 661799..672233
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A2J15_RS03255 (A2J15_003255) ispG 662322..663392 (-) 1071 WP_066776748.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase -
  A2J15_RS03260 (A2J15_003260) - 663549..664953 (+) 1405 Protein_635 DUF2972 domain-containing protein -
  A2J15_RS03270 (A2J15_003270) - 664964..666817 (-) 1854 WP_083074271.1 primosomal protein N' -
  A2J15_RS03275 (A2J15_003275) Cj0683 666799..667233 (-) 435 WP_066776745.1 type II secretion system protein Machinery gene
  A2J15_RS03280 (A2J15_003280) - 667230..667472 (-) 243 WP_066776742.1 hypothetical protein -
  A2J15_RS03285 (A2J15_003285) - 667462..667692 (-) 231 WP_066776739.1 hypothetical protein -
  A2J15_RS03290 (A2J15_003290) uvrB 667854..669827 (+) 1974 WP_066776736.1 excinuclease ABC subunit UvrB -
  A2J15_RS03295 (A2J15_003295) - 669868..671118 (-) 1251 WP_066776734.1 RNA polymerase factor sigma-54 -
  A2J15_RS03300 (A2J15_003300) lptB 671118..671846 (-) 729 WP_066776859.1 LPS export ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 16972.04 Da        Isoelectric Point: 8.4653

>NTDB_id=307927 A2J15_RS03275 WP_066776745.1 666799..667233(-) (Cj0683) [Campylobacter hepaticus strain HV10]
MKKAFTLLELIFVILIIGILTSLSSSFINITKDEVKILKLKTDYEMLNSALTLMRTQMQLKNLDFPSILDHARINHAREK
LFYCNDCGYSLLDTPIYSDFKFWMKIDKNHYSFFLNSKESIKFVYDPKEGLFKCLESFRCKDLI

Nucleotide


Download         Length: 435 bp        

>NTDB_id=307927 A2J15_RS03275 WP_066776745.1 666799..667233(-) (Cj0683) [Campylobacter hepaticus strain HV10]
ATGAAAAAAGCATTTACTTTGCTTGAACTTATTTTTGTAATATTAATTATAGGAATTTTAACGAGTTTGTCTTCATCTTT
TATAAATATTACTAAAGATGAAGTAAAAATATTAAAATTAAAAACAGATTATGAAATGTTAAATTCTGCTCTTACTTTAA
TGCGTACTCAAATGCAACTTAAAAATTTAGATTTCCCTAGTATCTTAGATCATGCAAGAATTAACCATGCTAGAGAAAAA
CTTTTTTATTGTAATGATTGTGGATATTCTTTGTTGGATACACCTATTTATTCTGATTTTAAATTTTGGATGAAAATTGA
TAAAAATCATTATAGTTTTTTCTTAAATTCTAAAGAATCGATTAAATTTGTTTATGATCCTAAAGAAGGCTTGTTTAAAT
GTTTGGAAAGTTTTAGATGCAAAGACTTGATATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-23)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A424Z019

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  Cj0683 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

75.862

100

0.764

Multiple sequence alignment