Detailed information NTG0307796

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: EYC10_RS02955
• Genome accession: NZ_CP036398
• Coordinates: 635034..637859 (+)
• Length: 941 a.a.
• NCBI ID: WP_001163955.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 8C10
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 630034..642859

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EYC10_RS07535	-	631144..631362 (-)	219	Protein_565	hypothetical protein	-
EYC10_RS02935	-	631427..632329 (-)	903	WP_188348599.1	S-adenosyl-l-methionine hydroxide adenosyltransferase family protein	-
EYC10_RS02940	-	632574..632916 (-)	343	Protein_567	hypothetical protein	-
EYC10_RS02945	rsmH	632936..633862 (-)	927	WP_001155562.1	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	-
EYC10_RS02950	hopE	634038..634859 (-)	822	WP_000395364.1	Hop family outer membrane protein HopE	-
EYC10_RS02955	uvrA	635034..637859 (+)	2826	WP_001163955.1	excinuclease ABC subunit UvrA	Machinery gene
EYC10_RS07720	-	638170..638636 (-)	467	Protein_571	hypothetical protein	-
EYC10_RS02970	-	638742..638996 (-)	255	WP_188348605.1	hypothetical protein	-
EYC10_RS02975	flgR	639139..640284 (-)	1146	WP_000684486.1	transcriptional activator FlgR	-
EYC10_RS02980	-	640281..640754 (-)	474	WP_001987528.1	hypothetical protein	-

Sequence

Protein

• Length: 941 a.a.
• Molecular weight: 104767.60 Da
• Isoelectric Point: 7.6217

>NTDB_id=307796 EYC10_RS02955 WP_001163955.1 635034..637859(+) (uvrA) [Helicobacter pylori strain 8C10]
MQHKTIMDKIIIQGARENNLKNIFLEIPKNQFVVFTGLSGSGKSTLAFDTLYAEGQRRYLESLSSYARQFLDKVGKPNVD
KIEGLTPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLFARIGEQFCPTCLEPISSMSASDIISQICHLEEDSKIIILAPI
IKDKKGSFNDKLESLRLKGYVRAFVDGVMVRLDEEIHLHKTKKHTIEAVVDRVVINSENSSRIASAVEKALKESYGELEV
EILQDNAPSIRKHYSEHKACFKCKMSFEELEPLSFSFNSPKGACESCLGLGTKFSLDISKILDPNTPLNQGAIKVIFGYN
RSYYAQMFEGFCEYNGIDTALCFNELNKEQQDALLYGNGTEISFHFKNSPLKRPWKGIIQIAYDMFKEQKDLSDYMSEKT
CSSCDGHRLKASSLSVQVAGLKMADFLTKPIEEVYHFFNDPTHFSYLNEQEKKIAEPILKEILERVFFLYDVGLGYLTLG
RDARTISGGESQRIRIASQIGSGLTGVLYVLDEPSIGLHEKDTLKLINTLRNLQKKGNTLIVVEHDKETIKHADFVVDIG
PKAGRHGGEVVFSGSVKDLLQNNHSTALYLNGTKKIERPKFEPPKEKHFLEIKNVNINNIKNLSVQIPLKQLVCITGVSG
SGKSSLILQTLLPTAQTLLNHAKKIQSLNGVEIVGLEHLDKVIYLDQAPIGKTPRSNPATYTGVMDEIRILFAEQKEAKI
LGYSASRFSFNVKGGRCEKCQGDGDIKIEMHFLPDVLVQCDSCKGTKYNPQTLEIKVKGKSIADVLNMSVEEAYEFFAKF
PKIAVKLKTLIDVGLGYITLGQNATTLSGGEAQRIKLAKELSKKDTGKTLYILDEPTTGLHFEDVNHLLQVLHSLVALGN
SMLVIEHNLDIIKNADYIIDMGPDGGDKGGKVIASGTPLEVAKNCEKTQSYTGKFLALELK

Nucleotide

• Length: 2826 bp

>NTDB_id=307796 EYC10_RS02955 WP_001163955.1 635034..637859(+) (uvrA) [Helicobacter pylori strain 8C10]
TTGCAACATAAAACCATTATGGATAAGATCATTATTCAAGGGGCTAGGGAAAATAATCTCAAAAATATTTTTTTAGAAAT
CCCTAAAAACCAGTTTGTTGTTTTTACCGGATTAAGCGGTTCGGGTAAATCCACTCTGGCGTTTGACACTTTATACGCTG
AAGGCCAAAGGCGTTATTTAGAGAGTTTGTCCAGCTATGCGAGGCAATTTTTAGACAAAGTGGGTAAGCCTAATGTGGAT
AAAATTGAAGGCCTAACCCCTGCGATTGCTATTGATCAAAAAACCACTTCTAAAAACCCTAGATCCACTGTGGGGACGAT
CACTGAGATTTATGATTATTTAAGGTTGTTGTTTGCAAGGATTGGGGAGCAATTTTGCCCCACATGTTTAGAGCCCATTA
GTTCTATGAGCGCGAGCGATATTATTTCTCAAATCTGTCATTTAGAAGAAGATTCTAAAATCATTATTCTAGCCCCCATT
ATTAAAGATAAAAAAGGTTCGTTTAACGATAAATTAGAGAGCTTGCGTTTGAAGGGGTATGTGAGGGCTTTTGTTGATGG
GGTGATGGTGCGTTTAGATGAAGAAATCCATTTGCACAAAACCAAAAAACACACCATTGAAGCGGTGGTGGATAGAGTGG
TTATCAATAGCGAAAATTCTTCACGGATCGCTAGCGCAGTAGAAAAAGCCCTTAAAGAAAGCTATGGGGAATTAGAAGTG
GAAATCTTGCAAGACAACGCGCCAAGCATCAGGAAGCATTACAGCGAGCATAAGGCATGCTTTAAATGCAAGATGAGTTT
TGAAGAATTAGAGCCTTTGAGTTTTTCATTCAATTCGCCTAAAGGGGCGTGCGAGAGCTGTTTGGGTTTGGGGACAAAAT
TCAGCTTAGATATTAGTAAGATTTTAGATCCTAACACGCCTTTAAATCAAGGAGCGATTAAAGTGATTTTTGGGTATAAC
CGCAGTTATTACGCTCAAATGTTTGAAGGTTTTTGCGAATATAATGGCATTGACACCGCGCTTTGTTTTAACGAATTGAA
TAAAGAGCAACAGGACGCTCTTTTGTATGGGAATGGCACTGAAATCAGCTTTCATTTTAAAAACAGCCCTTTAAAACGCC
CTTGGAAAGGCATTATCCAAATCGCTTATGACATGTTTAAAGAGCAGAAGGATTTGAGCGATTACATGAGCGAAAAAACC
TGTTCTTCGTGCGATGGGCATCGTTTGAAAGCTTCAAGTTTGAGCGTTCAAGTCGCTGGCTTGAAAATGGCGGATTTTTT
AACTAAGCCCATTGAAGAGGTCTATCACTTTTTTAATGATCCCACGCATTTTAGCTATCTTAACGAGCAAGAAAAAAAGA
TCGCTGAACCCATTTTAAAAGAGATTTTAGAAAGGGTGTTTTTTTTATACGATGTGGGGCTAGGGTATTTGACTTTAGGG
AGGGATGCGCGAACGATTAGCGGAGGAGAGAGCCAAAGGATACGAATCGCTAGTCAAATCGGGAGCGGTCTGACAGGGGT
TTTGTATGTTTTAGACGAGCCTAGCATTGGTTTGCATGAAAAAGACACGCTCAAACTCATCAACACCCTTAGGAATTTGC
AAAAAAAGGGGAACACGCTCATTGTTGTAGAACATGATAAAGAGACGATTAAACATGCGGATTTTGTTGTGGATATTGGG
CCAAAAGCTGGAAGGCATGGGGGTGAAGTGGTTTTTAGCGGGAGCGTAAAAGATTTATTGCAAAACAACCATTCTACCGC
TTTGTATCTCAACGGCACTAAAAAGATTGAGCGCCCTAAATTTGAACCCCCTAAAGAAAAGCATTTTTTAGAAATTAAAA
ATGTCAATATCAATAACATTAAGAATTTGAGCGTTCAAATCCCTTTAAAACAATTGGTGTGCATTACTGGGGTGAGCGGG
AGCGGTAAAAGCTCGCTGATTTTACAAACCCTTTTACCCACCGCTCAAACCCTTTTAAACCATGCTAAAAAAATTCAAAG
CTTGAATGGGGTGGAGATTGTAGGGTTGGAGCATTTGGATAAAGTGATTTATTTAGACCAAGCCCCCATAGGAAAAACCC
CACGAAGCAACCCTGCCACTTATACAGGAGTGATGGATGAAATCAGGATTTTATTTGCCGAGCAAAAAGAAGCTAAAATT
TTAGGTTATAGCGCGAGCCGTTTTAGCTTTAATGTTAAAGGGGGGCGGTGCGAGAAATGCCAAGGTGATGGGGATATTAA
AATAGAAATGCATTTCTTGCCTGATGTTTTAGTCCAATGCGATAGCTGTAAGGGCACTAAATACAACCCCCAAACTTTAG
AAATCAAGGTGAAAGGCAAATCCATTGCCGATGTGTTGAACATGAGCGTGGAAGAAGCCTATGAATTTTTTGCTAAATTC
CCTAAAATCGCTGTGAAGTTAAAAACCCTTATAGATGTGGGATTAGGCTATATCACTTTAGGGCAAAACGCTACGACTTT
AAGCGGGGGGGAGGCTCAAAGGATTAAATTAGCTAAAGAATTGAGTAAAAAAGACACAGGCAAAACCCTTTATATTTTAG
ATGAGCCTACCACCGGTTTGCATTTTGAAGATGTGAATCACCTTTTACAAGTCTTGCACTCTTTAGTGGCGTTAGGCAAT
TCCATGCTAGTGATTGAGCATAATTTAGACATTATTAAAAACGCTGATTACATTATAGACATGGGGCCTGATGGGGGGGA
TAAGGGCGGGAAAGTCATTGCGAGCGGCACGCCTTTAGAGGTGGCTAAAAATTGCGAAAAAACCCAAAGCTATACGGGAA
AATTTTTAGCTTTAGAATTGAAATAG

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (137-243)

• ABC transporter (ABC_tran) (621-857)

• UvrA DNA-binding domain (UvrA_DNA-bind) (297-390)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	50.052	100	0.509
uvrA	Streptococcus pneumoniae TIGR4	50.052	100	0.509
uvrA	Streptococcus pneumoniae D39	50.052	100	0.509