Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   AXA51_RS14460 Genome accession   NZ_CP031571
Coordinates   2888225..2888851 (-) Length   208 a.a.
NCBI ID   WP_017384804.1    Uniprot ID   A0AA37AJW2
Organism   Enterobacter hormaechei strain N1     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2883225..2893851
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AXA51_RS14445 (AXA51_14615) helD 2883464..2885518 (-) 2055 WP_129541514.1 DNA helicase IV -
  AXA51_RS14450 (AXA51_14620) - 2885641..2886087 (+) 447 WP_003858149.1 YccF domain-containing protein -
  AXA51_RS14455 (AXA51_14625) yccS 2886106..2888268 (+) 2163 WP_015570895.1 YccS family putative transporter -
  AXA51_RS14460 (AXA51_14630) sxy/tfoX 2888225..2888851 (-) 627 WP_017384804.1 TfoX/Sxy family DNA transformation protein Regulator
  AXA51_RS14465 (AXA51_14635) sulA 2889069..2889578 (+) 510 WP_026094322.1 SOS-induced cell division inhibitor SulA -
  AXA51_RS14470 (AXA51_14640) ompA 2889935..2890987 (+) 1053 WP_017694761.1 porin OmpA -
  AXA51_RS14475 (AXA51_14645) matP 2891053..2891505 (-) 453 WP_006809347.1 macrodomain Ter protein MatP -
  AXA51_RS14480 (AXA51_14650) - 2891692..2893452 (+) 1761 WP_045329593.1 Lon protease family protein -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24018.63 Da        Isoelectric Point: 9.4592

>NTDB_id=307710 AXA51_RS14460 WP_017384804.1 2888225..2888851(-) (sxy/tfoX) [Enterobacter hormaechei strain N1]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELMEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=307710 AXA51_RS14460 WP_017384804.1 2888225..2888851(-) (sxy/tfoX) [Enterobacter hormaechei strain N1]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCCTCTTTTCTGACCCTGATGAAACGAGGACGGCCAGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAGCTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAATCGGCTTAAGGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCCATCGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTATGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572

Multiple sequence alignment