Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | LR49_RS01400 | Genome accession | NZ_CP031537 |
| Coordinates | 288802..289101 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain WCH-SK2 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 283802..294101
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LR49_RS01375 (LR49_01375) | gcvPA | 285014..286360 (-) | 1347 | WP_000019684.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| LR49_RS01380 (LR49_01380) | gcvT | 286380..287471 (-) | 1092 | WP_000093351.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| LR49_RS01385 (LR49_01385) | - | 287630..288154 (-) | 525 | WP_116100530.1 | shikimate kinase | - |
| LR49_RS01390 (LR49_01390) | - | 288144..288290 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| LR49_RS01395 (LR49_01395) | comGF | 288387..288884 (-) | 498 | WP_001803317.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| LR49_RS01400 (LR49_01400) | comGE | 288802..289101 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| LR49_RS01405 (LR49_01405) | comGD | 289088..289534 (-) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| LR49_RS01410 (LR49_01410) | comGC | 289512..289823 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| LR49_RS01415 (LR49_01415) | comGB | 289837..290907 (-) | 1071 | WP_000775708.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| LR49_RS01420 (LR49_01420) | comGA | 290879..291853 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| LR49_RS01425 (LR49_01425) | - | 291905..292528 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| LR49_RS01430 (LR49_01430) | - | 292525..292854 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| LR49_RS01435 (LR49_01435) | - | 292854..293840 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| LR49_RS01440 (LR49_01440) | - | 293837..294040 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=307295 LR49_RS01400 WP_000844413.1 288802..289101(-) (comGE) [Staphylococcus aureus strain WCH-SK2]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=307295 LR49_RS01400 WP_000844413.1 288802..289101(-) (comGE) [Staphylococcus aureus strain WCH-SK2]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |