Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACICU_RS08140 | Genome accession | NC_010611 |
| Coordinates | 1720767..1721147 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii ACICU | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1715767..1726147
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACICU_RS08110 (ACICU_01604) | kdsB | 1716670..1717431 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| ACICU_RS08115 (ACICU_01605) | - | 1717443..1718423 (+) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| ACICU_RS08120 (ACICU_01606) | - | 1718435..1718776 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ACICU_RS08125 (ACICU_01607) | - | 1718794..1719567 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| ACICU_RS08130 (ACICU_01608) | - | 1719605..1720213 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ACICU_RS08135 (ACICU_01609) | - | 1720223..1720777 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| ACICU_RS08140 (ACICU_01610) | xcpV | 1720767..1721147 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACICU_RS08145 (ACICU_01611) | gspJ | 1721147..1721847 (+) | 701 | Protein_1609 | type II secretion system minor pseudopilin GspJ | - |
| ACICU_RS08150 (ACICU_01612) | gspK | 1721847..1722806 (+) | 960 | WP_000301479.1 | type II secretion system minor pseudopilin GspK | - |
| ACICU_RS08155 (ACICU_01613) | - | 1723037..1723633 (+) | 597 | WP_000908452.1 | 6-carboxytetrahydropterin synthase | - |
| ACICU_RS08160 (ACICU_01614) | ung | 1723684..1724397 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| ACICU_RS08165 (ACICU_01615) | - | 1724394..1725518 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACICU_RS08170 (ACICU_01616) | tadA | 1725525..1726028 (+) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=30729 ACICU_RS08140 WP_000836911.1 1720767..1721147(+) (xcpV) [Acinetobacter baumannii ACICU]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=30729 ACICU_RS08140 WP_000836911.1 1720767..1721147(+) (xcpV) [Acinetobacter baumannii ACICU]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |