Detailed information NTG0307235

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: DXT74_RS00675
• Genome accession: NZ_CP031514
• Coordinates: 125019..126164 (+)
• Length: 381 a.a.
• NCBI ID: WP_081555061.1
• Uniprot ID: -
• Organism: Chromobacterium sp. Rain0013
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 120019..131164

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DXT74_RS00625 (DXT74_00630)	rplK	120615..121046 (-)	432	WP_019100246.1	50S ribosomal protein L11	-
DXT74_RS00630 (DXT74_00635)	nusG	121146..121679 (-)	534	WP_043594671.1	transcription termination/antitermination protein NusG	-
DXT74_RS00635 (DXT74_00640)	secE	121679..122035 (-)	357	WP_081574308.1	preprotein translocase subunit SecE	-
DXT74_RS00645 (DXT74_00650)	tuf	122192..123382 (-)	1191	WP_081555062.1	elongation factor Tu	-
DXT74_RS00665 (DXT74_00670)	-	123869..124120 (-)	252	WP_019100314.1	YfhL family 4Fe-4S dicluster ferredoxin	-
DXT74_RS00670 (DXT74_00675)	rsmD	124224..124781 (-)	558	WP_043592276.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
DXT74_RS00675 (DXT74_00680)	pilA	125019..126164 (+)	1146	WP_081555061.1	signal recognition particle-docking protein FtsY	Machinery gene
DXT74_RS00680 (DXT74_00685)	ftsE	126225..126878 (+)	654	WP_043592279.1	cell division ATP-binding protein FtsE	-
DXT74_RS00685 (DXT74_00690)	ftsX	126875..127783 (+)	909	WP_019102028.1	permease-like cell division protein FtsX	-
DXT74_RS00690 (DXT74_00695)	rpoH	127969..128832 (+)	864	WP_019102027.1	RNA polymerase sigma factor RpoH	-
DXT74_RS00695 (DXT74_00700)	-	128904..130688 (-)	1785	WP_194427087.1	PglL family O-oligosaccharyltransferase	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 40668.72 Da
• Isoelectric Point: 6.1724

>NTDB_id=307235 DXT74_RS00675 WP_081555061.1 125019..126164(+) (pilA) [Chromobacterium sp. Rain0013]
MFSFFKRKPQSEPTPPTTVQTEPAADAQTIIPPEVAAPAIQQPETRAPEPQHSSAAPAEAVPASTRADTPPEPPQVSLKK
MSWAERLKAGLSKTRDKLGKSLAGLFGGGKIDEELYEELETVLLTADMGVDATQHLLDDVRERVSLKGLKDASELKDALK
GSLSDLISPLEKPLDVNGKKPFVIMMAGVNGAGKTTSIGKLAKYYQSQGKSVLLAAGDTFRAAAREQLMAWGERNNVTVI
AQQGGDSAAVCYDAIQAAVARGIDIVLADTAGRLPTQLHLMEEIKKVKRVIQKALPDAPHEIILVLDANIGQNAITQVKT
FDDALGLTGLILSKLDGTAKGGVIAAIAKQRPVPLRFVGVGESIDDLRPFKAKDYIDALFD

Nucleotide

• Length: 1146 bp

>NTDB_id=307235 DXT74_RS00675 WP_081555061.1 125019..126164(+) (pilA) [Chromobacterium sp. Rain0013]
ATGTTTAGCTTCTTCAAAAGAAAACCCCAGTCCGAGCCCACGCCCCCGACAACAGTCCAAACGGAGCCTGCGGCCGACGC
TCAAACCATCATCCCGCCCGAAGTGGCCGCCCCTGCCATCCAACAACCGGAAACACGCGCGCCCGAGCCGCAGCACTCCT
CGGCAGCACCCGCCGAAGCCGTCCCAGCCTCGACGCGCGCCGATACGCCGCCCGAGCCCCCTCAGGTTTCTCTGAAAAAA
ATGAGCTGGGCGGAACGGCTGAAAGCCGGCCTCTCAAAAACCCGCGACAAGCTGGGGAAATCCCTGGCTGGTCTGTTTGG
CGGCGGCAAGATCGACGAAGAGTTGTACGAGGAACTGGAAACCGTTCTGCTCACCGCCGACATGGGGGTGGACGCCACGC
AGCACCTGCTCGACGACGTGCGCGAGCGTGTTTCGCTGAAAGGGCTGAAGGATGCTTCTGAACTGAAAGACGCATTGAAA
GGGTCGCTCAGCGATTTGATCTCGCCACTGGAAAAACCGCTGGACGTTAACGGCAAGAAACCCTTCGTCATCATGATGGC
CGGCGTCAACGGCGCCGGCAAGACTACATCGATAGGCAAGCTGGCCAAGTACTATCAAAGCCAGGGCAAGAGCGTGTTGC
TGGCTGCCGGCGACACCTTCCGCGCCGCCGCGCGCGAACAGCTGATGGCCTGGGGCGAGCGCAACAACGTCACCGTGATC
GCCCAGCAAGGGGGCGACTCCGCAGCCGTTTGCTACGACGCGATTCAAGCCGCGGTCGCCCGCGGCATCGACATCGTGCT
GGCAGATACCGCGGGCCGCCTGCCCACCCAACTGCACCTCATGGAAGAGATCAAGAAGGTGAAGCGGGTAATCCAAAAGG
CTTTGCCGGACGCGCCGCATGAAATCATCCTGGTTCTGGACGCCAATATCGGCCAGAACGCCATCACTCAGGTCAAGACT
TTTGACGACGCCCTCGGCCTGACCGGGCTAATCTTGAGCAAGCTGGACGGCACCGCCAAGGGCGGCGTAATCGCGGCCAT
CGCCAAGCAACGCCCCGTTCCGCTGCGCTTTGTCGGCGTGGGCGAAAGCATAGACGACCTGCGGCCGTTCAAGGCCAAGG
ACTACATCGACGCGCTGTTCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (181-380)

• SRP54-type protein, helical bundle domain (SRP54_N) (96-163)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	60.911	100	0.667