Detailed information
Bioinformatically predicted
Overview
| Name | pepF | Type | Regulator |
| Locus tag | DS830_RS08315 | Genome accession | NZ_CP031513 |
| Coordinates | 1733091..1734887 (+) | Length | 598 a.a. |
| NCBI ID | WP_205526815.1 | Uniprot ID | - |
| Organism | Bombilactobacillus bombi strain BI-2.5 | ||
| Function | degradation of XIP; competence shut-off (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1728091..1739887
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DS830_RS08295 (DS830_08295) | - | 1729476..1730561 (+) | 1086 | WP_240366803.1 | ABC transporter permease | - |
| DS830_RS08300 (DS830_08300) | - | 1730558..1731514 (+) | 957 | WP_118908988.1 | ABC transporter permease | - |
| DS830_RS08305 (DS830_08305) | - | 1731569..1732375 (-) | 807 | WP_118908989.1 | tyrosine-protein phosphatase | - |
| DS830_RS08310 (DS830_08310) | - | 1732517..1733017 (+) | 501 | WP_118899849.1 | universal stress protein | - |
| DS830_RS08315 (DS830_08315) | pepF | 1733091..1734887 (+) | 1797 | WP_205526815.1 | oligoendopeptidase F | Regulator |
| DS830_RS08320 (DS830_08320) | - | 1734933..1737431 (+) | 2499 | WP_118908991.1 | excinuclease ABC subunit UvrA | - |
| DS830_RS08325 (DS830_08325) | - | 1737724..1738221 (+) | 498 | WP_118899845.1 | hypothetical protein | - |
| DS830_RS08330 (DS830_08330) | - | 1738296..1738817 (+) | 522 | WP_118908992.1 | GNAT family N-acetyltransferase | - |
Sequence
Protein
Download Length: 598 a.a. Molecular weight: 68541.73 Da Isoelectric Point: 4.9825
>NTDB_id=307234 DS830_RS08315 WP_205526815.1 1733091..1734887(+) (pepF) [Bombilactobacillus bombi strain BI-2.5]
MQKLPTRAEVPVELTWDLTKIFINDQEFEDNLQQAIDSNQKITRIAGTLAQSASALKKGIDAVLALYRQVEKLAVYASMK
SDQDTANNHYQAYQAQVNSLLAQVDANVAFLEPEILEIPPEKLNKFKQDFQLQSYQHFLDMITINRNHVLDAQSEALLSA
AGDVMQTASNTFNVLDNSDLKFPVVTDEKGQQYQLSDGVYSRLLESGDQSVRQKAFMALYQVYGQFKNTFATTLAGEVKK
NNYLAQVHHYSSAREQAMSQNYIPTTVYDTLITEVNQHLDLLHRYVALRKQILNVSELHMYDMYTPLVGQPPLTYTFSSA
KQTAKQALAVLGADYLEHVDEIFNNRDIDVVENQGKVSGAYSGGSYDTAPYELLNWQDNLDNLYTLVHETGHSVHSWYTR
HYQPYMYGDYPIFIAEIASTTNENILTEYLLQTQTDPKVRAYVLNYYLDGFKGTIYRQTQFAQFEHFIHQADAQGKALTA
DYMSSYYEQLNARYYGNDVINDPQIAFEWTRIPHFYMNYYVYQYATGFAAASYLSSQIMQQKPHARDKYLHYLQTGSSEY
PIQIMQQAGVDMTKPDYLEAAFATFAQRLDELEKLLSK
MQKLPTRAEVPVELTWDLTKIFINDQEFEDNLQQAIDSNQKITRIAGTLAQSASALKKGIDAVLALYRQVEKLAVYASMK
SDQDTANNHYQAYQAQVNSLLAQVDANVAFLEPEILEIPPEKLNKFKQDFQLQSYQHFLDMITINRNHVLDAQSEALLSA
AGDVMQTASNTFNVLDNSDLKFPVVTDEKGQQYQLSDGVYSRLLESGDQSVRQKAFMALYQVYGQFKNTFATTLAGEVKK
NNYLAQVHHYSSAREQAMSQNYIPTTVYDTLITEVNQHLDLLHRYVALRKQILNVSELHMYDMYTPLVGQPPLTYTFSSA
KQTAKQALAVLGADYLEHVDEIFNNRDIDVVENQGKVSGAYSGGSYDTAPYELLNWQDNLDNLYTLVHETGHSVHSWYTR
HYQPYMYGDYPIFIAEIASTTNENILTEYLLQTQTDPKVRAYVLNYYLDGFKGTIYRQTQFAQFEHFIHQADAQGKALTA
DYMSSYYEQLNARYYGNDVINDPQIAFEWTRIPHFYMNYYVYQYATGFAAASYLSSQIMQQKPHARDKYLHYLQTGSSEY
PIQIMQQAGVDMTKPDYLEAAFATFAQRLDELEKLLSK
Nucleotide
Download Length: 1797 bp
>NTDB_id=307234 DS830_RS08315 WP_205526815.1 1733091..1734887(+) (pepF) [Bombilactobacillus bombi strain BI-2.5]
ATTCAAAAACTGCCAACTCGCGCTGAAGTTCCAGTCGAATTAACTTGGGATTTAACTAAAATTTTTATTAATGATCAAGA
ATTTGAAGACAATTTGCAACAGGCAATAGATTCTAACCAGAAAATCACCCGCATTGCTGGAACTTTAGCACAATCAGCGT
CAGCTCTAAAGAAAGGGATAGATGCAGTATTAGCTTTATATCGGCAAGTAGAAAAATTAGCCGTTTATGCAAGTATGAAA
AGTGATCAAGACACTGCTAATAATCATTACCAAGCTTATCAAGCTCAAGTTAATAGCTTATTAGCCCAAGTAGATGCCAA
TGTAGCGTTTTTAGAGCCAGAAATTTTGGAGATTCCACCAGAAAAATTAAATAAGTTTAAACAAGATTTTCAATTGCAGA
GCTATCAACATTTTTTAGATATGATTACAATTAATCGCAATCACGTTTTAGATGCTCAAAGTGAGGCATTACTTTCAGCG
GCTGGTGATGTTATGCAGACCGCTAGTAACACTTTTAATGTGTTAGATAATTCGGATTTAAAATTTCCAGTGGTCACAGA
TGAAAAAGGGCAACAATATCAATTATCAGACGGTGTTTACAGTCGATTATTAGAGTCTGGAGATCAAAGTGTTCGCCAAA
AAGCATTTATGGCTTTGTATCAAGTGTACGGTCAATTTAAAAATACTTTTGCCACGACTTTAGCCGGAGAAGTTAAAAAG
AATAATTATTTAGCACAAGTACATCATTATTCCAGCGCGCGTGAACAAGCAATGTCCCAAAATTATATTCCGACTACAGT
TTACGACACTCTGATTACAGAAGTTAATCAACACTTAGATTTACTCCATCGTTATGTTGCTTTACGCAAACAAATTTTGA
ATGTTTCAGAGTTGCATATGTATGATATGTATACCCCCTTAGTTGGTCAACCTCCTTTAACTTATACTTTTAGTAGTGCT
AAACAAACGGCTAAACAGGCTTTAGCCGTGTTGGGTGCAGACTATTTGGAGCATGTCGATGAAATTTTTAATAATCGCGA
TATTGATGTGGTAGAGAATCAAGGTAAAGTTTCAGGAGCTTATTCAGGTGGTTCTTATGATACTGCACCCTATGAATTAT
TAAATTGGCAGGATAATTTGGACAATTTATATACATTAGTTCATGAAACCGGACATAGTGTGCATAGCTGGTATACTCGT
CACTATCAACCTTATATGTATGGTGATTATCCGATTTTTATCGCAGAAATTGCTTCCACAACAAATGAAAATATTTTGAC
AGAATATTTATTACAGACGCAAACAGATCCCAAAGTTCGCGCCTATGTTTTAAATTATTATTTAGATGGTTTTAAAGGTA
CTATTTATCGACAAACCCAATTTGCCCAATTTGAACATTTTATTCATCAGGCAGATGCTCAAGGTAAAGCCTTAACAGCA
GATTATATGTCTAGTTATTATGAGCAGTTAAATGCACGTTATTATGGTAATGATGTGATTAATGATCCGCAAATTGCGTT
CGAATGGACACGGATCCCACATTTTTATATGAATTATTATGTTTATCAATATGCGACTGGTTTTGCGGCCGCTTCATATC
TTAGTTCCCAGATTATGCAACAAAAGCCCCATGCACGTGACAAGTATCTCCATTATTTACAAACAGGAAGCTCAGAATAT
CCAATTCAAATTATGCAACAAGCAGGAGTAGATATGACGAAACCGGATTATTTAGAAGCTGCTTTTGCCACTTTTGCCCA
AAGATTAGATGAATTAGAAAAGTTACTTAGCAAATAA
ATTCAAAAACTGCCAACTCGCGCTGAAGTTCCAGTCGAATTAACTTGGGATTTAACTAAAATTTTTATTAATGATCAAGA
ATTTGAAGACAATTTGCAACAGGCAATAGATTCTAACCAGAAAATCACCCGCATTGCTGGAACTTTAGCACAATCAGCGT
CAGCTCTAAAGAAAGGGATAGATGCAGTATTAGCTTTATATCGGCAAGTAGAAAAATTAGCCGTTTATGCAAGTATGAAA
AGTGATCAAGACACTGCTAATAATCATTACCAAGCTTATCAAGCTCAAGTTAATAGCTTATTAGCCCAAGTAGATGCCAA
TGTAGCGTTTTTAGAGCCAGAAATTTTGGAGATTCCACCAGAAAAATTAAATAAGTTTAAACAAGATTTTCAATTGCAGA
GCTATCAACATTTTTTAGATATGATTACAATTAATCGCAATCACGTTTTAGATGCTCAAAGTGAGGCATTACTTTCAGCG
GCTGGTGATGTTATGCAGACCGCTAGTAACACTTTTAATGTGTTAGATAATTCGGATTTAAAATTTCCAGTGGTCACAGA
TGAAAAAGGGCAACAATATCAATTATCAGACGGTGTTTACAGTCGATTATTAGAGTCTGGAGATCAAAGTGTTCGCCAAA
AAGCATTTATGGCTTTGTATCAAGTGTACGGTCAATTTAAAAATACTTTTGCCACGACTTTAGCCGGAGAAGTTAAAAAG
AATAATTATTTAGCACAAGTACATCATTATTCCAGCGCGCGTGAACAAGCAATGTCCCAAAATTATATTCCGACTACAGT
TTACGACACTCTGATTACAGAAGTTAATCAACACTTAGATTTACTCCATCGTTATGTTGCTTTACGCAAACAAATTTTGA
ATGTTTCAGAGTTGCATATGTATGATATGTATACCCCCTTAGTTGGTCAACCTCCTTTAACTTATACTTTTAGTAGTGCT
AAACAAACGGCTAAACAGGCTTTAGCCGTGTTGGGTGCAGACTATTTGGAGCATGTCGATGAAATTTTTAATAATCGCGA
TATTGATGTGGTAGAGAATCAAGGTAAAGTTTCAGGAGCTTATTCAGGTGGTTCTTATGATACTGCACCCTATGAATTAT
TAAATTGGCAGGATAATTTGGACAATTTATATACATTAGTTCATGAAACCGGACATAGTGTGCATAGCTGGTATACTCGT
CACTATCAACCTTATATGTATGGTGATTATCCGATTTTTATCGCAGAAATTGCTTCCACAACAAATGAAAATATTTTGAC
AGAATATTTATTACAGACGCAAACAGATCCCAAAGTTCGCGCCTATGTTTTAAATTATTATTTAGATGGTTTTAAAGGTA
CTATTTATCGACAAACCCAATTTGCCCAATTTGAACATTTTATTCATCAGGCAGATGCTCAAGGTAAAGCCTTAACAGCA
GATTATATGTCTAGTTATTATGAGCAGTTAAATGCACGTTATTATGGTAATGATGTGATTAATGATCCGCAAATTGCGTT
CGAATGGACACGGATCCCACATTTTTATATGAATTATTATGTTTATCAATATGCGACTGGTTTTGCGGCCGCTTCATATC
TTAGTTCCCAGATTATGCAACAAAAGCCCCATGCACGTGACAAGTATCTCCATTATTTACAAACAGGAAGCTCAGAATAT
CCAATTCAAATTATGCAACAAGCAGGAGTAGATATGACGAAACCGGATTATTTAGAAGCTGCTTTTGCCACTTTTGCCCA
AAGATTAGATGAATTAGAAAAGTTACTTAGCAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pepF | Streptococcus salivarius strain HSISS4 |
51.096 |
99.164 |
0.507 |