Detailed information
Bioinformatically predicted
Overview
| Name | comN | Type | Machinery gene |
| Locus tag | DXX82_RS07995 | Genome accession | NZ_CP031477 |
| Coordinates | 1636157..1636675 (+) | Length | 172 a.a. |
| NCBI ID | WP_049366104.1 | Uniprot ID | - |
| Organism | Haemophilus parainfluenzae strain M27794 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1631157..1641675
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXX82_RS07975 | thiP | 1631796..1633400 (+) | 1605 | WP_049366110.1 | thiamine/thiamine pyrophosphate ABC transporter permease ThiP | - |
| DXX82_RS07980 | thiQ | 1633393..1634022 (+) | 630 | WP_049366108.1 | thiamine ABC transporter ATP-binding protein | - |
| DXX82_RS07985 | bioB | 1634096..1635112 (+) | 1017 | WP_049366106.1 | biotin synthase BioB | - |
| DXX82_RS07990 | suhB | 1635157..1635957 (-) | 801 | WP_005695663.1 | inositol-1-monophosphatase | - |
| DXX82_RS07995 | comN | 1636157..1636675 (+) | 519 | WP_049366104.1 | hypothetical protein | Machinery gene |
| DXX82_RS08000 | comO | 1636663..1637388 (+) | 726 | WP_049366102.1 | type II secretion system protein J | Machinery gene |
| DXX82_RS08005 | comP | 1637385..1638071 (+) | 687 | WP_049366101.1 | DUF2572 family protein | Machinery gene |
| DXX82_RS08010 | comQ | 1638085..1638351 (+) | 267 | WP_014065666.1 | DUF5374 domain-containing protein | Machinery gene |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 20186.37 Da Isoelectric Point: 8.9317
>NTDB_id=307145 DXX82_RS07995 WP_049366104.1 1636157..1636675(+) (comN) [Haemophilus parainfluenzae strain M27794]
MYKGITLLETLIVLFILSLTLAFTLPKWQKNDPKYFLEKEQQRLYFFLRNIQARAENSSAIWFILANQDRANQRWCITAQ
VKNDHFCDCFHPQNCPKNLYAHFYYPYFEGKTMLIGPKLYPSEVAVKFNGARNTMETNCFMLQAEEHRTLFSFFNVGSIK
LKPDQAASACTR
MYKGITLLETLIVLFILSLTLAFTLPKWQKNDPKYFLEKEQQRLYFFLRNIQARAENSSAIWFILANQDRANQRWCITAQ
VKNDHFCDCFHPQNCPKNLYAHFYYPYFEGKTMLIGPKLYPSEVAVKFNGARNTMETNCFMLQAEEHRTLFSFFNVGSIK
LKPDQAASACTR
Nucleotide
Download Length: 519 bp
>NTDB_id=307145 DXX82_RS07995 WP_049366104.1 1636157..1636675(+) (comN) [Haemophilus parainfluenzae strain M27794]
ATGTATAAAGGGATAACTTTATTAGAAACCTTGATTGTATTATTTATTTTAAGCTTAACGTTGGCGTTTACATTGCCTAA
ATGGCAGAAAAACGATCCCAAATATTTTCTCGAAAAAGAGCAACAACGGCTTTATTTTTTCTTACGCAATATTCAAGCGA
GGGCAGAAAATTCATCAGCGATTTGGTTTATTTTGGCTAATCAAGATAGAGCGAATCAACGTTGGTGTATTACTGCTCAA
GTAAAAAACGATCATTTTTGTGATTGTTTTCATCCCCAGAATTGTCCTAAAAACCTTTATGCGCATTTTTACTATCCTTA
TTTTGAAGGAAAAACGATGCTGATAGGCCCTAAATTATATCCGTCAGAAGTGGCGGTGAAATTTAATGGGGCCAGAAATA
CCATGGAAACAAATTGTTTTATGTTACAGGCGGAAGAACATCGTACATTGTTTTCTTTTTTCAACGTGGGCAGTATCAAA
TTAAAGCCTGATCAAGCGGCGAGTGCATGTACAAGATGA
ATGTATAAAGGGATAACTTTATTAGAAACCTTGATTGTATTATTTATTTTAAGCTTAACGTTGGCGTTTACATTGCCTAA
ATGGCAGAAAAACGATCCCAAATATTTTCTCGAAAAAGAGCAACAACGGCTTTATTTTTTCTTACGCAATATTCAAGCGA
GGGCAGAAAATTCATCAGCGATTTGGTTTATTTTGGCTAATCAAGATAGAGCGAATCAACGTTGGTGTATTACTGCTCAA
GTAAAAAACGATCATTTTTGTGATTGTTTTCATCCCCAGAATTGTCCTAAAAACCTTTATGCGCATTTTTACTATCCTTA
TTTTGAAGGAAAAACGATGCTGATAGGCCCTAAATTATATCCGTCAGAAGTGGCGGTGAAATTTAATGGGGCCAGAAATA
CCATGGAAACAAATTGTTTTATGTTACAGGCGGAAGAACATCGTACATTGTTTTCTTTTTTCAACGTGGGCAGTATCAAA
TTAAAGCCTGATCAAGCGGCGAGTGCATGTACAAGATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comN | Haemophilus influenzae Rd KW20 |
59.412 |
98.837 |
0.587 |