Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   ACICU_RS00985 Genome accession   NC_010611
Coordinates   209419..210573 (-) Length   384 a.a.
NCBI ID   WP_000755268.1    Uniprot ID   A0A9P3CTL8
Organism   Acinetobacter baumannii ACICU     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 204419..215573
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACICU_RS00965 (ACICU_00185) - 205579..206229 (+) 651 WP_001984979.1 TetR/AcrR family transcriptional regulator -
  ACICU_RS00970 (ACICU_00186) - 206335..207255 (+) 921 WP_002023238.1 DMT family transporter -
  ACICU_RS00975 (ACICU_00187) - 207648..208217 (-) 570 WP_000633612.1 L-threonylcarbamoyladenylate synthase -
  ACICU_RS00980 (ACICU_00188) dprA 208268..209398 (-) 1131 WP_002019199.1 DNA-processing protein DprA Machinery gene
  ACICU_RS00985 (ACICU_00189) tsaP 209419..210573 (-) 1155 WP_000755268.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  ACICU_RS00990 (ACICU_00190) def 210696..211226 (+) 531 WP_001196539.1 peptide deformylase -
  ACICU_RS00995 (ACICU_00191) - 211263..211691 (+) 429 WP_000231984.1 DUF2946 family protein -
  ACICU_RS01000 (ACICU_00192) - 211764..213878 (+) 2115 WP_001120667.1 TonB-dependent copper receptor -
  ACICU_RS01005 (ACICU_00193) - 213932..214139 (+) 208 Protein_197 hypothetical protein -
  ACICU_RS01010 (ACICU_00194) - 214209..215423 (-) 1215 WP_001177962.1 oxygenase MpaB family protein -

Sequence


Protein


Download         Length: 384 a.a.        Molecular weight: 42364.30 Da        Isoelectric Point: 8.5816

>NTDB_id=30710 ACICU_RS00985 WP_000755268.1 209419..210573(-) (tsaP) [Acinetobacter baumannii ACICU]
MKKVFNGMVNFHALGIKKHLLALALCTGIAIGTIAEVHATSPNHNPPSLKSNAPNVYVVKRGDTLWDISGHFLNKPWRWP
EIWASNQHVKNPHWIYPGDRLLLCSLDGRPLVGKDEGDGCVGIIRRYTGQTTNLQPQVRVEALNNSVPVIPLEHIKQWLE
NSTILPADSITNTPYIVGTADQRVLAGKGQTIYARGQGLINGQRYAVYREGEPYYFTDNKGKKHSLGIELLQVASGVAVS
SEKDITTLELTDSYNAEVRRGDRVMPEEQATLPTLFYPVDAKQVTDGGKIIRVMGSIGRAAKNSVVTLDRGTTQGIQVGQ
VFDITQQGESIRDPKTKEVIQLPGQQIGSLMVFRTFDQLSYAYVLESDLPIKVGSSIQPPQFND

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=30710 ACICU_RS00985 WP_000755268.1 209419..210573(-) (tsaP) [Acinetobacter baumannii ACICU]
ATGAAAAAGGTTTTTAACGGCATGGTTAATTTTCATGCCTTGGGGATAAAGAAGCATTTACTTGCCTTGGCGCTCTGTAC
AGGTATCGCAATCGGTACGATAGCAGAGGTTCATGCAACCAGTCCGAACCATAATCCACCCTCACTTAAAAGTAATGCAC
CCAATGTATATGTTGTAAAACGTGGGGATACTTTATGGGATATTTCAGGACATTTTCTAAATAAACCATGGCGTTGGCCT
GAAATCTGGGCGAGCAACCAACATGTTAAAAATCCACACTGGATCTATCCGGGTGACCGATTACTATTATGTAGCCTAGA
TGGGCGTCCTTTAGTCGGTAAAGATGAGGGCGATGGTTGTGTAGGTATTATTCGCCGCTACACTGGTCAAACCACAAACC
TACAACCACAAGTTCGCGTCGAAGCATTAAATAATAGCGTTCCGGTTATTCCACTTGAACATATTAAACAGTGGTTAGAG
AACAGTACTATTTTACCAGCCGACTCAATTACCAACACACCTTATATTGTTGGTACAGCCGATCAACGTGTACTTGCAGG
AAAAGGCCAGACTATTTATGCACGAGGACAAGGCTTAATTAATGGGCAGCGTTATGCAGTCTACCGAGAAGGTGAACCTT
ACTATTTCACAGACAATAAAGGTAAAAAGCATAGTTTAGGGATTGAGCTACTACAGGTTGCTTCAGGTGTTGCGGTATCT
TCTGAAAAAGATATTACTACATTAGAACTAACAGATAGTTATAACGCTGAAGTACGTCGTGGCGATCGTGTTATGCCTGA
AGAACAAGCTACTTTGCCAACATTATTTTACCCAGTAGATGCGAAGCAAGTGACGGATGGTGGCAAGATTATTCGTGTCA
TGGGTTCAATTGGTAGAGCTGCAAAAAATAGTGTAGTGACTTTGGACCGCGGTACAACTCAGGGCATTCAAGTAGGTCAA
GTTTTTGATATTACTCAACAAGGTGAATCAATTCGCGACCCTAAAACCAAAGAAGTAATTCAACTTCCTGGCCAACAAAT
TGGCAGTCTAATGGTTTTTAGAACTTTTGATCAGCTAAGTTATGCTTATGTTTTAGAGAGCGATTTACCAATTAAGGTTG
GTTCAAGCATTCAGCCACCTCAATTTAATGATTAA

Domains


Predicted by InterproScan.

(57-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

99.219

100

0.992


Multiple sequence alignment