Detailed information NTG0307066

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: DVV14_RS13005
• Genome accession: NZ_CP031472
• Coordinates: 2807084..2808091 (+)
• Length: 335 a.a.
• NCBI ID: WP_006963339.1
• Uniprot ID: A0A097QNP8
• Organism: Vibrio coralliilyticus strain RE22
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2802084..2813091

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DVV14_RS12985 (DVV14_13055)	metJ	2802188..2802508 (+)	321	WP_006963343.1	met regulon transcriptional regulator MetJ	-
DVV14_RS12990 (DVV14_13060)	-	2802596..2803873 (-)	1278	WP_006963342.1	malic enzyme-like NAD(P)-binding protein	-
DVV14_RS12995 (DVV14_13065)	rpmE	2804125..2804343 (-)	219	WP_006963341.1	50S ribosomal protein L31	-
DVV14_RS13000 (DVV14_13070)	priA	2804634..2806835 (+)	2202	WP_064488822.1	primosomal protein N'	-
DVV14_RS13005 (DVV14_13075)	cytR	2807084..2808091 (+)	1008	WP_006963339.1	DNA-binding transcriptional regulator CytR	Regulator
DVV14_RS13010 (DVV14_13080)	-	2808206..2808754 (+)	549	WP_064488821.1	SPOR domain-containing protein	-
DVV14_RS13015 (DVV14_13085)	hslV	2808916..2809461 (+)	546	WP_006963336.1	ATP-dependent protease subunit HslV	-
DVV14_RS13020 (DVV14_13090)	hslU	2809499..2810833 (+)	1335	WP_038513914.1	HslU--HslV peptidase ATPase subunit	-
DVV14_RS13025 (DVV14_13095)	-	2810998..2811681 (+)	684	WP_064488820.1	nitroreductase family protein	-
DVV14_RS13030 (DVV14_13100)	frdD	2811741..2812118 (-)	378	WP_021457299.1	fumarate reductase subunit FrdD	-
DVV14_RS13035 (DVV14_13105)	frdC	2812131..2812514 (-)	384	WP_064488819.1	fumarate reductase subunit FrdC	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36965.58 Da
• Isoelectric Point: 6.0455

>NTDB_id=307066 DVV14_RS13005 WP_006963339.1 2807084..2808091(+) (cytR) [Vibrio coralliilyticus strain RE22]
MATMKDVAQLAGVSTATVSRALMNPEKVSSATRKRVEDAVLEAGYSPNSLARNLRRNESKTIIAIIPDICDPYYTEIIRG
IEDAAMEHGYIVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQMGHKRIAQISGPSSAVLCQFRYQGYQQALRRAGISMNPNYCIYGDFSFEDGAKAVRQLLALPEPPTA
IFCHNDAMAIGAIQEAKKLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TQLVVRESAAPPRVI

Nucleotide

• Length: 1008 bp

>NTDB_id=307066 DVV14_RS13005 WP_006963339.1 2807084..2808091(+) (cytR) [Vibrio coralliilyticus strain RE22]
ATGGCGACAATGAAGGATGTTGCTCAGCTAGCAGGCGTTTCAACTGCAACAGTATCGCGTGCTCTAATGAACCCGGAAAA
AGTATCTTCAGCTACAAGGAAGCGAGTAGAAGATGCAGTATTAGAAGCCGGATATTCACCAAATTCTCTGGCGCGCAACC
TGCGCCGAAATGAGTCCAAAACCATAATTGCAATCATCCCAGATATTTGTGATCCCTACTACACAGAGATCATCCGTGGA
ATTGAAGACGCTGCGATGGAACATGGATACATCGTGCTGCTGGGAGACAGTGGTCAGCAGAAAAAGCGTGAGAGTTCTTT
TGTCAATCTTGTCTTTACTAAGCAGGCCGATGGAATGTTGCTGCTTGGTACTGATCTGCCGTTTGACGTCAGCAAACCTG
AGCAGAAAAACCTGCCGCCTATGGTGATGGCATGTGAGTTTGCACCTGAACTGGAGCTGCCAACGGTGCACATTGATAAC
CTGACATCGGCATTTGAAGCCGTGAACTATCTTACGCAGATGGGTCACAAGCGCATTGCTCAGATTTCGGGCCCTAGTTC
TGCGGTACTATGCCAGTTCCGCTACCAAGGTTACCAGCAAGCGTTACGCCGAGCCGGCATTAGTATGAATCCGAATTACT
GTATCTACGGTGACTTCTCGTTTGAAGATGGTGCGAAAGCCGTCAGACAATTGTTGGCTTTACCTGAGCCGCCAACCGCG
ATTTTCTGTCACAACGATGCGATGGCCATCGGGGCAATTCAAGAAGCGAAGAAGCTGGGCTTGCGCGTCCCGCAAGATCT
GTCAGTCGTTGGCTTTGATGATATTCAGTTTGCTCAGTACTGCGATCCACCACTGACGACGATTTCTCAGCCACGTTACG
AGATTGGCCGACAGGCAATGTTGATGATGCTTGAGTTGTTGCGCGGCCATGATGTTCGTGCCGGTTCTCGATTGCTGGAA
ACTCAGCTGGTTGTCAGGGAAAGCGCTGCTCCACCGCGAGTCATCTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A097QNP8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	92.771	99.104	0.919
cytR	Vibrio parahaemolyticus RIMD 2210633	90.09	99.403	0.896