Detailed information NTG0307066

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: EXA24_RS11020
• Genome accession: NZ_CP036376
• Coordinates: 2151648..2152757 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264870.1
• Uniprot ID: Q3JYE9
• Organism: Streptococcus agalactiae strain Sag153
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2146648..2157757

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EXA24_RS10995 (EXA24_11385)	-	2147020..2147859 (-)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-
EXA24_RS11000 (EXA24_11390)	pgsA	2147859..2148401 (-)	543	WP_000239224.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
EXA24_RS11005 (EXA24_11395)	-	2148524..2149807 (-)	1284	WP_000217765.1	pitrilysin family protein	-
EXA24_RS11010 (EXA24_11400)	-	2149809..2151053 (-)	1245	WP_000706190.1	pitrilysin family protein	-
EXA24_RS11015 (EXA24_11405)	yaaA	2151292..2151645 (+)	354	WP_000384867.1	S4 domain-containing protein YaaA	-
EXA24_RS11020 (EXA24_11410)	recF	2151648..2152757 (+)	1110	WP_000264870.1	DNA replication/repair protein RecF	Machinery gene
EXA24_RS11025 (EXA24_11415)	-	2152769..2153635 (-)	867	WP_000398683.1	GRP family sugar transporter	-
EXA24_RS11030 (EXA24_11420)	-	2153691..2154353 (-)	663	WP_001871057.1	helix-turn-helix transcriptional regulator	-
EXA24_RS11035 (EXA24_11425)	guaB	2154428..2155909 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
EXA24_RS11040 (EXA24_11430)	-	2156066..2156551 (-)	486	WP_001034427.1	arginine repressor	-
EXA24_RS11045 (EXA24_11435)	-	2156561..2157241 (-)	681	WP_000628848.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42471.27 Da
• Isoelectric Point: 7.3132

>NTDB_id=307066 EXA24_RS11020 WP_000264870.1 2151648..2152757(+) (recF) [Streptococcus agalactiae strain Sag153]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=307066 EXA24_RS11020 WP_000264870.1 2151648..2152757(+) (recF) [Streptococcus agalactiae strain Sag153]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCATCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGCCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAGCATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAATGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q3JYE9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.636	98.374	0.626
recF	Bacillus subtilis subsp. subtilis str. 168	44.837	99.729	0.447