Detailed information NTG0307048

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: DVV14_RS09335
• Genome accession: NZ_CP031472
• Coordinates: 2058154..2061540 (+)
• Length: 1128 a.a.
• NCBI ID: WP_064488020.1
• Uniprot ID: -
• Organism: Vibrio coralliilyticus strain RE22
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2053154..2066540

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DVV14_RS09315 (DVV14_09370)	erpA	2053620..2053961 (-)	342	WP_019276906.1	iron-sulfur cluster insertion protein ErpA	-
DVV14_RS09320 (DVV14_09375)	hemL	2054217..2055509 (+)	1293	WP_064488018.1	glutamate-1-semialdehyde 2,1-aminomutase	-
DVV14_RS09325 (DVV14_09380)	-	2055773..2056858 (+)	1086	WP_064488019.1	AI-2E family transporter	-
DVV14_RS09330 (DVV14_09385)	rsmC	2056937..2057959 (+)	1023	WP_064488202.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
DVV14_RS09335 (DVV14_09390)	chiS	2058154..2061540 (+)	3387	WP_064488020.1	response regulator	Regulator
DVV14_RS09340 (DVV14_09395)	-	2062227..2063909 (+)	1683	WP_006958092.1	ABC transporter substrate-binding protein	-
DVV14_RS09345 (DVV14_09400)	-	2064080..2065066 (+)	987	WP_006958093.1	ABC transporter permease	-
DVV14_RS09350 (DVV14_09405)	-	2065069..2066094 (+)	1026	WP_006958094.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127159.97 Da
• Isoelectric Point: 6.1927

>NTDB_id=307048 DVV14_RS09335 WP_064488020.1 2058154..2061540(+) (chiS) [Vibrio coralliilyticus strain RE22]
MFKLYRKQRFKRLQHTLMLAFLVLSITPLTIIAIFFLQSHTKDLQEQSTSHLISVRDSKQQQVTDYMYAKESEVMGFVRS
ELAYASGGRFYGLVNAFRSLGLDMAQAREYAQRRYIPGSGDQIKTSILPQSNVYTGTERYRLLHKRYHRAYLELLKRSDF
DDALLVDLEGNVTYSIFKHDNYGTNLLTGRFRDTNLGRTFHKLKTQVTEKRKSNEDYTPVIISDFEMDRGKPVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLIADTNNASAMKTLLVGADHKSRTMAYEQKDIDKSREVVDLALEGKTDVGTYTNTLGEA
TIAAYSPISFKGVDWAIVVEVPEKEAFARVHQLETLFVFAMLCAIVLVVAASHYLSNFITAPLLKLTWAAEKVSAGDLDT
DIINTERKDEIGRLAISFERMQRSIRDKILLIKQQNEELESNLKLIQKQNDELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPITADHKYQLDIIISSGQRLATLVDDLLDYHKMRYGNLDIETRAVDISGATRLVLELSTHLVGNKPIRI
INQVPNDPLWVCADPQRLEQVLYNLVGNAIKYTSEGKIVISATQVDDNIRVQVVDTGQGIPAEQLEHIFEPLIQAGSDSS
RYRQGAGLGLSISRQLIDLMQGTLYVSSQPMVGTTFSFTLPIASTEQIGLASHIEGAHFIAPENNDLEIIEGSNLPENPD
GPLLLVVDDEPVNLRVLDSFLRLEGYRVRTAKNGEEAVESVGHEKPELMLLDIMMPGMSGYQVCEVLRKDYDHAQLPVIM
LTALNQPDDRVRGFEAGANDYLSKPFNKQELAARITAHLTASKAEQRRIENQQLQTELKQRAMVEASLLETQGRLLEQLE
SAPEAIICVRDDNKIRFTNDAASRLFKRTTEQLRRSNADELIAPKFLNVEQPHYCGVIDVYVEDVRQHLSADILKLPEGS
GLKSMYIFNVGGSVNAARINNLETAVEALSSYAFEGDKAKLQELKELGGEFTRLADRATTDNKSKQEVMREVLVDAMTSA
LTYWESVTGQSKFAFAEQSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLSSLDYILEHCKEMSPERTHIESLRD
KLQHLLTN

Nucleotide

• Length: 3387 bp

>NTDB_id=307048 DVV14_RS09335 WP_064488020.1 2058154..2061540(+) (chiS) [Vibrio coralliilyticus strain RE22]
ATGTTTAAGTTGTACCGAAAACAAAGATTTAAGCGCCTGCAACACACTTTAATGCTGGCATTTCTTGTATTGAGTATTAC
GCCACTCACGATCATCGCGATCTTTTTCCTCCAGTCTCATACCAAAGATTTGCAGGAGCAAAGTACTTCGCACTTAATCT
CCGTACGAGACAGTAAACAGCAACAAGTCACTGACTACATGTACGCCAAAGAATCGGAAGTTATGGGCTTTGTTCGCTCT
GAACTGGCTTATGCCAGTGGCGGGCGTTTCTACGGCTTAGTCAATGCGTTTCGTAGCTTAGGCCTGGATATGGCTCAGGC
GCGCGAGTACGCACAGCGGCGCTACATTCCTGGCTCAGGCGATCAGATCAAAACCTCAATACTTCCTCAGTCCAATGTTT
ATACTGGCACTGAGCGCTATCGGCTGCTACATAAACGCTATCACAGAGCCTATCTGGAACTGCTCAAACGCTCAGACTTT
GACGATGCTTTATTGGTTGATTTAGAAGGTAACGTCACCTATTCCATCTTTAAACACGACAACTACGGCACCAATCTGCT
GACTGGCCGCTTTCGCGATACCAATCTAGGTCGAACCTTCCACAAGCTAAAAACTCAGGTCACTGAAAAGCGTAAATCCA
ATGAAGATTACACACCAGTAATCATTTCAGACTTTGAGATGGACAGAGGTAAACCTGTCGCGTGGCTCGGCGCTCCCATC
GTTCAGCAAGGTTATCTCCACAGCTACGCCATGTTCCGTTTACCAAACAATGGCATCACTAAGCTAATAGCTGATACCAA
CAACGCTTCAGCAATGAAAACTTTACTGGTAGGTGCTGACCATAAATCAAGAACCATGGCGTATGAGCAAAAAGACATCG
ACAAGAGCCGCGAAGTTGTTGATTTAGCATTGGAAGGAAAAACCGATGTCGGGACATACACAAACACGCTCGGAGAAGCG
ACCATCGCCGCTTATAGCCCGATTTCGTTTAAGGGTGTCGACTGGGCCATTGTGGTAGAAGTGCCAGAAAAAGAAGCTTT
TGCACGCGTCCACCAACTCGAAACTCTGTTTGTATTTGCCATGCTATGTGCAATTGTACTGGTGGTTGCCGCGTCCCATT
ACTTATCTAACTTTATTACCGCACCTTTATTGAAGTTGACGTGGGCGGCAGAAAAAGTCTCGGCTGGCGATCTCGATACG
GACATCATCAATACAGAGCGAAAAGATGAGATAGGCCGACTCGCCATCAGTTTTGAGCGCATGCAACGCTCCATTCGCGA
TAAAATACTGCTCATAAAACAGCAAAATGAAGAGCTGGAAAGCAACCTAAAGCTGATCCAAAAGCAAAATGACGAGCTGC
AATTGGCAAACAAACTCAAAGATGAGTTCCTCGCCACCACCTCTCATGAATTGCGAACTCCACTCCATGGCATGGTAGGT
ATCGCAGAAGCGCTAATCTCCGGAGCCAATGGGCCCATTACCGCGGATCACAAGTACCAGCTCGATATCATCATCAGTAG
CGGCCAGCGCTTGGCCACCTTGGTTGATGACCTGCTTGATTACCACAAAATGCGTTACGGTAATCTCGATATTGAAACCC
GAGCTGTGGATATCTCCGGAGCAACGCGCTTGGTGCTCGAACTGTCGACTCACTTAGTGGGCAACAAACCCATTCGCATC
ATTAATCAGGTTCCTAACGATCCGCTATGGGTATGCGCCGACCCTCAACGCTTAGAACAAGTGCTATACAACCTCGTTGG
CAACGCAATCAAATACACCAGTGAGGGTAAAATCGTCATTTCCGCCACTCAGGTCGACGACAACATCCGCGTTCAAGTAG
TAGATACTGGTCAGGGGATCCCAGCAGAGCAACTAGAGCACATTTTTGAACCCCTGATTCAGGCTGGCAGTGATAGCAGC
CGTTATCGCCAAGGGGCCGGTCTTGGTCTATCTATCAGTCGTCAGTTGATTGATTTGATGCAAGGCACTCTTTACGTCAG
CAGCCAGCCTATGGTTGGTACGACATTTAGCTTCACTTTGCCAATCGCCTCAACCGAGCAAATAGGCCTCGCAAGCCATA
TCGAAGGCGCGCATTTCATTGCTCCAGAAAACAATGACCTAGAAATAATCGAAGGCTCAAATTTACCGGAAAATCCAGAC
GGGCCATTGCTGTTAGTGGTCGATGATGAACCGGTCAATCTGCGTGTCTTAGACAGCTTCCTTCGCCTCGAAGGCTACCG
AGTACGCACCGCGAAAAATGGCGAAGAAGCCGTTGAATCCGTTGGTCATGAAAAACCAGAACTGATGCTACTCGATATCA
TGATGCCGGGAATGAGCGGCTACCAGGTGTGTGAAGTCTTGCGCAAAGACTATGACCATGCTCAGCTCCCCGTCATCATG
CTCACAGCATTGAATCAGCCCGATGACCGAGTTCGAGGTTTCGAAGCCGGAGCCAATGACTACTTATCAAAACCTTTTAA
CAAACAAGAGCTCGCCGCACGGATTACAGCACATTTAACCGCGAGCAAAGCTGAACAGCGTCGGATTGAAAACCAGCAAC
TACAAACGGAGCTTAAGCAACGCGCCATGGTTGAAGCCAGTTTACTGGAAACTCAGGGGCGTCTACTTGAGCAATTGGAA
TCAGCCCCAGAAGCGATTATCTGTGTACGTGACGACAATAAAATCCGCTTCACCAATGATGCAGCTTCTCGCCTGTTTAA
ACGCACCACAGAACAATTACGCCGTTCCAATGCAGATGAGTTGATTGCACCAAAATTCCTTAACGTAGAACAGCCGCACT
ACTGTGGCGTCATTGATGTTTATGTCGAAGATGTCCGCCAGCACTTGTCCGCAGACATTCTCAAACTTCCAGAAGGCTCT
GGACTTAAATCCATGTACATCTTTAACGTGGGGGGCAGTGTCAATGCCGCGCGGATCAATAACCTAGAAACCGCGGTTGA
AGCCCTTTCCAGCTACGCGTTTGAAGGGGATAAGGCCAAACTGCAAGAGTTAAAAGAGTTAGGTGGGGAGTTTACGCGGT
TAGCCGATCGAGCCACCACTGATAACAAGTCCAAGCAAGAAGTCATGCGTGAAGTCTTAGTAGATGCAATGACAAGTGCG
CTAACTTATTGGGAAAGCGTTACTGGTCAAAGCAAGTTTGCTTTCGCAGAGCAAAGCGGCTTATGGCGTGTGTACCTCGA
CCGTAGCACCTTACAGACTCGGACTCTGGACAAATACCTGCGAGTCGAAACGTTACCAAAAACACCGCGCTGGCGAACGG
TACTGAGTTCTCTTGACTACATCCTTGAACACTGTAAAGAGATGAGCCCAGAGCGCACTCATATTGAGAGCCTACGCGAT
AAGCTGCAACACCTCCTAACCAACTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (725-835)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-682)

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	79.167	100	0.792