Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | D9K49_RS03135 | Genome accession | NZ_CP036202 |
| Coordinates | 629980..630420 (+) | Length | 146 a.a. |
| NCBI ID | WP_000360927.1 | Uniprot ID | - |
| Organism | Escherichia coli strain L725 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 624980..635420
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9K49_RS03115 (D9K49_03115) | aroP | 625978..627351 (+) | 1374 | WP_000969915.1 | aromatic amino acid transporter AroP | - |
| D9K49_RS03120 (D9K49_03120) | ampE | 627394..628248 (-) | 855 | WP_000172005.1 | beta-lactamase regulator AmpE | - |
| D9K49_RS03125 (D9K49_03125) | ampD | 628245..628796 (-) | 552 | WP_000923721.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| D9K49_RS03130 (D9K49_03130) | nadC | 628884..629777 (+) | 894 | WP_001135168.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| D9K49_RS03135 (D9K49_03135) | pilA | 629980..630420 (+) | 441 | WP_000360927.1 | prepilin peptidase-dependent pilin | Machinery gene |
| D9K49_RS03140 (D9K49_03140) | pilB | 630430..631815 (+) | 1386 | WP_001025170.1 | type II secretion system protein GspE | Machinery gene |
| D9K49_RS03145 (D9K49_03145) | hofC | 631805..633007 (+) | 1203 | WP_000157236.1 | protein transport protein HofC | - |
| D9K49_RS03150 (D9K49_03150) | guaC | 633042..634085 (-) | 1044 | WP_001217338.1 | GMP reductase | - |
| D9K49_RS25360 | - | 634241..634285 (-) | 45 | WP_120795372.1 | protein YacM | - |
| D9K49_RS03155 (D9K49_03155) | coaE | 634310..634930 (+) | 621 | WP_001269520.1 | dephospho-CoA kinase | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 15533.60 Da Isoelectric Point: 4.2529
>NTDB_id=306800 D9K49_RS03135 WP_000360927.1 629980..630420(+) (pilA) [Escherichia coli strain L725]
MDKQSGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTH
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
MDKQSGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTH
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
Nucleotide
Download Length: 441 bp
>NTDB_id=306800 D9K49_RS03135 WP_000360927.1 629980..630420(+) (pilA) [Escherichia coli strain L725]
ATGGACAAGCAAAGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCAC
TATGTTTCAGCCATGAGTGTGGCAAAAGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGACTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
ATGGACAAGCAAAGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCAC
TATGTTTCAGCCATGAGTGTGGCAAAAGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGACTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
42.742 |
84.932 |
0.363 |