Detailed information NTG0030680

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: SDEG_RS06285
• Genome accession: NC_012891
• Coordinates: 1228222..1230429 (-)
• Length: 735 a.a.
• NCBI ID: WP_012767136.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis GGS_124
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1223222..1235429

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SDEG_RS06255 (SDEG_1273)	-	1223618..1224439 (-)	822	WP_012767133.1	ZIP family metal transporter	-
SDEG_RS06260 (SDEG_1274)	-	1224457..1225245 (-)	789	WP_003054664.1	Nif3-like dinuclear metal center hexameric protein	-
SDEG_RS06265 (SDEG_1275)	-	1225235..1225921 (-)	687	WP_012767134.1	tRNA (adenine(22)-N(1))-methyltransferase	-
SDEG_RS06270 (SDEG_1276)	nth	1226002..1226658 (-)	657	WP_003054655.1	endonuclease III	-
SDEG_RS06275 (SDEG_1277)	-	1226655..1227338 (-)	684	WP_003054653.1	DnaD domain-containing protein	-
SDEG_RS06280 (SDEG_1278)	-	1227556..1228074 (-)	519	WP_003054649.1	adenine phosphoribosyltransferase	-
SDEG_RS06285 (SDEG_1279)	recJ	1228222..1230429 (-)	2208	WP_012767136.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
SDEG_RS06290 (SDEG_1280)	-	1230426..1231190 (-)	765	WP_012767137.1	SDR family NAD(P)-dependent oxidoreductase	-
SDEG_RS06295 (SDEG_1281)	rnz	1231190..1232119 (-)	930	WP_003054662.1	ribonuclease Z	-
SDEG_RS06300 (SDEG_1282)	-	1232134..1232769 (-)	636	WP_012767138.1	cystathionine beta-lyase	-
SDEG_RS06305 (SDEG_1283)	hflX	1232762..1234000 (-)	1239	WP_041789038.1	GTPase HflX	-
SDEG_RS06310 (SDEG_1284)	miaA	1234088..1234972 (-)	885	WP_003057843.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	-
SDEG_RS10630 (SDEG_1285)	-	1235105..1235281 (+)	177	WP_012767140.1	DUF3042 family protein	-

Sequence

Protein

• Length: 735 a.a.
• Molecular weight: 81909.57 Da
• Isoelectric Point: 4.5663

>NTDB_id=30680 SDEG_RS06285 WP_012767136.1 1228222..1230429(-) (recJ) [Streptococcus dysgalactiae subsp. equisimilis GGS_124]
MIKSKYSWKIEDKKPDDGFFKLAKAKGLSQTAAQLIYERGIRTEEALDEFLTADLSQLHDPYLLHDMEKAVLRIRQAIED
GEQILVYGDYDADGMTSASIVKEALDMMGAEPLVYLPNRFTDGYGPNQSVYKYFIEQEAVSLIITVDNGVAGHEALSYAQ
TQGIDVIVTDHHSLPEELPEAFAIIHPEHPDADYPFKHLAGCGVAFKLATALLESLPTDCLDLVAIGTIADMVSLTGENR
VLVKNGLTMLKHTERVGLQELMSLSSIDLDQFTEDAVGFQIAPQLNALGRLDDPNPAIELLTGFDDQEAQAIALMIKEKN
EERKALVQDIFDQAMAMVDPQKPVQVLAQAGWHPGVLGIVAGRIMEAIGQTVIVLAIDNGFAKGSARSLEAINIFEALSG
NRDLFTAFGGHAGAAGMTLPVDNLEALSDLLCQFVIERGLDQTAKNTLTIDERLSLEDLSLDTLKSLDKLAPYGMDHPKP
IFYVKDIKVSQARTMGQDQSHLKFKVSQGKTSFDVLAFGQGSQLQDFQQATGLELAVTLSVNHWNGNTSLQLMLVDARVE
GVQLLDLRSKTAKLPEGIPTIEEDPNATVIVIKELPESFKDWRHQFADRTFDAIYFKNQIKHPYYLTGFGSREQFAKLYK
TIYQFPEFDVRHKLTDLSRYLNIDKLLLIKLIQIFEELAFVTIEDGLMTVNPQAQKRDISESRIYQELKELVKFQEIMAL
ASPQEMYDYLVNSKP

Nucleotide

• Length: 2208 bp

>NTDB_id=30680 SDEG_RS06285 WP_012767136.1 1228222..1230429(-) (recJ) [Streptococcus dysgalactiae subsp. equisimilis GGS_124]
ATGATTAAATCCAAATATAGTTGGAAAATAGAAGACAAGAAGCCAGATGATGGCTTCTTTAAGCTAGCAAAAGCAAAAGG
CCTGTCCCAGACCGCCGCTCAGTTGATTTACGAGCGAGGGATAAGGACTGAAGAAGCCTTAGATGAGTTTTTAACAGCGG
ACTTGTCTCAACTGCATGACCCTTATTTGCTACATGATATGGAAAAAGCTGTGCTAAGGATTCGTCAAGCCATTGAAGAT
GGTGAGCAGATTTTGGTTTACGGAGACTATGATGCTGATGGCATGACGTCGGCATCCATTGTCAAAGAAGCCTTAGACAT
GATGGGGGCAGAGCCTTTGGTTTATCTTCCCAACCGCTTTACAGATGGCTACGGCCCCAACCAAAGTGTTTATAAGTACT
TTATTGAGCAGGAGGCTGTCTCCTTAATTATAACAGTGGATAATGGAGTAGCTGGGCACGAAGCGCTTAGCTATGCCCAG
ACACAGGGAATTGATGTCATTGTAACTGACCATCATAGCCTGCCCGAAGAATTGCCAGAGGCCTTTGCCATCATTCACCC
TGAGCATCCCGATGCTGACTATCCTTTTAAACACTTAGCTGGCTGTGGCGTTGCCTTTAAATTGGCAACTGCTTTGCTAG
AAAGTTTGCCAACAGACTGTCTAGATTTGGTAGCTATTGGAACCATTGCTGATATGGTAAGCTTGACAGGTGAAAACCGT
GTCTTGGTCAAAAATGGCTTGACCATGCTAAAACACACTGAAAGAGTGGGGTTGCAGGAACTGATGTCCTTGTCTTCTAT
TGATTTGGACCAATTTACGGAAGATGCTGTTGGGTTTCAGATTGCTCCCCAGTTGAATGCCTTAGGTCGTTTAGATGATC
CTAATCCAGCTATTGAGCTACTGACGGGCTTTGATGATCAAGAAGCCCAAGCGATTGCCTTGATGATTAAGGAAAAAAAT
GAAGAGCGTAAGGCTTTGGTCCAAGACATTTTTGATCAAGCGATGGCTATGGTTGATCCTCAAAAACCAGTTCAAGTCTT
AGCTCAAGCTGGTTGGCATCCAGGTGTGCTAGGTATTGTAGCGGGTCGCATTATGGAAGCCATTGGACAGACGGTCATTG
TCTTAGCTATTGATAACGGTTTTGCGAAAGGCTCGGCCAGAAGTTTAGAGGCCATTAATATATTTGAAGCCTTAAGTGGG
AATCGTGATCTTTTTACAGCTTTCGGTGGACATGCTGGTGCAGCTGGGATGACTTTGCCCGTGGATAATTTAGAAGCTTT
ATCGGACTTGCTTTGTCAGTTTGTGATAGAACGTGGCTTAGATCAGACTGCTAAAAATACGTTAACTATTGATGAAAGGC
TGTCTTTGGAGGATCTTAGTCTTGATACTTTAAAGAGTTTGGACAAACTAGCCCCCTATGGGATGGATCATCCTAAGCCA
ATCTTTTATGTTAAGGATATTAAAGTTAGTCAAGCGCGTACCATGGGTCAAGACCAGAGTCATCTTAAATTCAAAGTCAG
CCAGGGTAAGACCTCCTTTGATGTTCTGGCTTTTGGTCAAGGAAGCCAACTACAAGACTTTCAACAAGCTACTGGTTTAG
AGTTAGCGGTAACTTTATCCGTCAACCACTGGAACGGCAATACCAGCCTCCAACTAATGTTGGTTGACGCTCGTGTTGAA
GGGGTGCAGTTGCTTGATTTACGGTCAAAAACAGCTAAACTACCCGAAGGTATTCCGACGATTGAGGAAGATCCCAATGC
AACAGTTATTGTTATTAAAGAGCTTCCAGAGTCTTTTAAAGACTGGCGTCATCAGTTCGCTGATAGAACCTTCGATGCCA
TTTATTTTAAAAATCAGATTAAACACCCCTATTACCTAACAGGTTTTGGAAGTCGTGAACAGTTTGCTAAACTCTATAAA
ACCATTTACCAATTTCCAGAATTTGATGTGCGTCATAAATTGACTGACTTGAGTCGCTACTTAAACATTGACAAACTTTT
ACTGATTAAGCTCATTCAGATTTTTGAAGAGCTAGCTTTTGTGACGATTGAAGATGGCCTGATGACAGTTAACCCACAAG
CGCAAAAGCGAGATATTTCTGAGAGTCGTATCTACCAAGAGCTAAAAGAACTCGTGAAGTTCCAAGAAATCATGGCCTTG
GCCAGTCCTCAAGAAATGTATGATTATTTGGTCAATTCGAAACCATAA

Domains

Predicted by InterProScan.

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (588-729)

• DHHA1 domain (DHHA1) (317-435)

• DHH family (DHH) (83-228)

• RecJ OB domain (RecJ_OB) (450-556)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Streptococcus pneumoniae strain D39V	64.189	100	0.646
recJ	Bacillus subtilis subsp. subtilis str. 168	35.723	100	0.38