Detailed information NTG0306773

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: DYB08_RS19305
• Genome accession: NZ_CP031444
• Coordinates: 3924170..3924871 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain MDR-UNC
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3919170..3929871

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DYB08_RS19270 (DYB08_19280)	kdsB	3919693..3920454 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
DYB08_RS19275 (DYB08_19285)	-	3920466..3921446 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
DYB08_RS19280 (DYB08_19290)	-	3921458..3921799 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
DYB08_RS19285 (DYB08_19295)	-	3921817..3922590 (+)	774	WP_000497298.1	TatD family hydrolase	-
DYB08_RS19290 (DYB08_19300)	-	3922628..3923236 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
DYB08_RS19295 (DYB08_19305)	-	3923246..3923800 (+)	555	WP_000841373.1	type II secretion system protein	-
DYB08_RS19300 (DYB08_19310)	xcpV	3923790..3924170 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
DYB08_RS19305 (DYB08_19315)	xcpW	3924170..3924871 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
DYB08_RS19310 (DYB08_19320)	gspK	3924871..3925830 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
DYB08_RS19315 (DYB08_19325)	-	3926061..3926657 (+)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
DYB08_RS19320 (DYB08_19330)	ung	3926708..3927421 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
DYB08_RS19325 (DYB08_19335)	-	3927418..3928542 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
DYB08_RS19330 (DYB08_19340)	tadA	3928549..3929052 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
DYB08_RS19335 (DYB08_19345)	-	3929122..3929565 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=306773 DYB08_RS19305 WP_000594589.1 3924170..3924871(+) (xcpW) [Acinetobacter baumannii strain MDR-UNC]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=306773 DYB08_RS19305 WP_000594589.1 3924170..3924871(+) (xcpW) [Acinetobacter baumannii strain MDR-UNC]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996