Detailed information
Bioinformatically predicted
Overview
| Name | hns | Type | Regulator |
| Locus tag | DYB08_RS11575 | Genome accession | NZ_CP031444 |
| Coordinates | 2395503..2395829 (+) | Length | 108 a.a. |
| NCBI ID | WP_000801427.1 | Uniprot ID | N9J3X5 |
| Organism | Acinetobacter baumannii strain MDR-UNC | ||
| Function | repress the expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2390503..2400829
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DYB08_RS11550 (DYB08_11555) | hemC | 2391120..2392037 (+) | 918 | WP_031944971.1 | hydroxymethylbilane synthase | - |
| DYB08_RS11555 (DYB08_11560) | - | 2392042..2392809 (+) | 768 | WP_000897421.1 | uroporphyrinogen-III synthase | - |
| DYB08_RS11560 (DYB08_11565) | - | 2392818..2393657 (+) | 840 | WP_001230204.1 | hypothetical protein | - |
| DYB08_RS11565 (DYB08_11570) | - | 2393667..2394860 (+) | 1194 | WP_000681783.1 | hypothetical protein | - |
| DYB08_RS11570 (DYB08_11575) | - | 2394868..2395308 (+) | 441 | WP_000661570.1 | acyl-CoA thioesterase | - |
| DYB08_RS11575 (DYB08_11580) | hns | 2395503..2395829 (+) | 327 | WP_000801427.1 | H-NS family nucleoid-associated regulatory protein | Regulator |
| DYB08_RS11580 (DYB08_11585) | gspN | 2396162..2396905 (+) | 744 | WP_000730343.1 | type II secretion system protein N | - |
| DYB08_RS11585 (DYB08_11590) | - | 2396905..2397741 (+) | 837 | WP_000870033.1 | type II secretion system protein N | - |
| DYB08_RS11590 (DYB08_11595) | gspD | 2397783..2400059 (+) | 2277 | WP_001196426.1 | type II secretion system secretin GspD | - |
| DYB08_RS11595 (DYB08_11600) | - | 2400100..2400729 (+) | 630 | WP_000219967.1 | FHA domain-containing protein | - |
Sequence
Protein
Download Length: 108 a.a. Molecular weight: 12462.12 Da Isoelectric Point: 5.0524
>NTDB_id=306757 DYB08_RS11575 WP_000801427.1 2395503..2395829(+) (hns) [Acinetobacter baumannii strain MDR-UNC]
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
Nucleotide
Download Length: 327 bp
>NTDB_id=306757 DYB08_RS11575 WP_000801427.1 2395503..2395829(+) (hns) [Acinetobacter baumannii strain MDR-UNC]
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTTAGTGTTGAACAACTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACGGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTTAGTGTTGAACAACTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACGGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| hns | Acinetobacter baumannii strain A118 |
100 |
100 |
1 |