Detailed information NTG0306740

Bioinformatically predicted

Overview

• Name: pilW
• Type: Machinery gene
• Locus tag: DYB08_RS08300
• Genome accession: NZ_CP031444
• Coordinates: 1719371..1720372 (-)
• Length: 333 a.a.
• NCBI ID: WP_000079200.1
• Uniprot ID: A0A9P3CZV1
• Organism: Acinetobacter baumannii strain MDR-UNC
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1714371..1725372

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DYB08_RS08290 (DYB08_08290)	pilY1	1714690..1718544 (-)	3855	WP_000768970.1	PilC/PilY family type IV pilus protein	Machinery gene
DYB08_RS08295 (DYB08_08295)	pilX	1718556..1719374 (-)	819	WP_000149374.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene
DYB08_RS08300 (DYB08_08300)	pilW	1719371..1720372 (-)	1002	WP_000079200.1	PilW family protein	Machinery gene
DYB08_RS08305 (DYB08_08305)	pilV	1720373..1720933 (-)	561	WP_085916952.1	type IV pilus modification protein PilV	Machinery gene
DYB08_RS08310 (DYB08_08310)	fimU	1720927..1721400 (-)	474	WP_001214061.1	Tfp pilus assembly protein FimT/FimU	Machinery gene
DYB08_RS08315 (DYB08_08315)	ispH	1721570..1722520 (-)	951	WP_000407064.1	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	-
DYB08_RS08320 (DYB08_08320)	gmk	1722643..1723272 (+)	630	WP_000015937.1	guanylate kinase	-
DYB08_RS08325 (DYB08_08325)	rpoZ	1723345..1723623 (+)	279	WP_000135049.1	DNA-directed RNA polymerase subunit omega	-
DYB08_RS08330 (DYB08_08330)	-	1723745..1724404 (+)	660	WP_000782406.1	IS1595-like element ISAba36 family transposase	-
DYB08_RS20340	-	1724419..1724511 (+)	93	Protein_1612	hypothetical protein	-

Sequence

Protein

• Length: 333 a.a.
• Molecular weight: 35829.53 Da
• Isoelectric Point: 5.7207

>NTDB_id=306740 DYB08_RS08300 WP_000079200.1 1719371..1720372(-) (pilW) [Acinetobacter baumannii strain MDR-UNC]
MAQSFISNKEQGFTLIELIVALALGLILVAAATQLFIGGLLSSRLQKANAEIQDSGIFGLEYMARDIRLLNYGNVVNPQL
TDTTPWGGIVLTGSTATNANNINFIPKVDTNTYIPEALLSRGAGDTVSTVNNYWKGLSNIQNSSNAEVQSDQLTIQFIAP
TNMTNCEGVNVLAGDLIVQRYFLRVDNNGSSQQDYALACDANTPAVSATAQPDIVNGLGDAGQIILPRIDHFHVLLGAKN
AAGNFAYYTIPQYRVAAQAARDASPAVAAPRILSIQISVLARSTNNAQNKAIDPNQSFLMLDQNVHAADNRTRFLRRVYS
VTIALRNAMGETI

Nucleotide

• Length: 1002 bp

>NTDB_id=306740 DYB08_RS08300 WP_000079200.1 1719371..1720372(-) (pilW) [Acinetobacter baumannii strain MDR-UNC]
ATGGCTCAATCATTTATTTCTAATAAAGAACAAGGTTTTACCTTGATTGAACTTATAGTCGCCTTAGCTTTAGGCCTAAT
ATTAGTGGCTGCTGCAACACAGCTATTTATTGGAGGGCTTTTATCGAGCCGATTGCAAAAGGCCAATGCTGAAATCCAGG
ACAGCGGTATTTTTGGTTTGGAATATATGGCACGTGATATACGGCTTCTAAATTATGGAAATGTTGTAAATCCACAATTA
ACAGATACAACGCCTTGGGGAGGTATTGTATTAACAGGTTCAACAGCAACAAATGCCAACAATATTAATTTTATTCCAAA
AGTTGATACAAATACTTATATTCCGGAAGCGTTATTAAGCCGTGGTGCAGGTGATACGGTAAGTACAGTGAATAACTACT
GGAAAGGTCTTTCAAATATACAGAATAGTTCAAATGCTGAAGTACAAAGCGATCAACTGACTATTCAATTCATTGCCCCG
ACCAATATGACTAATTGTGAAGGTGTGAATGTGTTAGCGGGGGACCTAATAGTTCAACGGTATTTTTTACGTGTTGATAA
TAATGGTAGCTCTCAACAGGATTATGCACTTGCATGTGATGCGAATACCCCTGCGGTTAGTGCTACAGCGCAACCTGATA
TCGTTAATGGATTAGGAGATGCAGGCCAAATTATACTGCCTCGTATTGACCATTTTCATGTCTTATTAGGTGCGAAAAAC
GCAGCTGGTAATTTTGCTTATTACACAATTCCTCAGTATCGGGTGGCTGCACAAGCTGCTCGAGATGCGAGTCCAGCTGT
GGCTGCTCCAAGAATTCTGTCAATACAAATATCGGTATTAGCCCGTTCTACAAATAATGCTCAAAATAAGGCAATAGACC
CTAATCAGTCTTTTCTTATGCTAGATCAGAATGTGCATGCTGCCGATAACAGAACTCGCTTTTTGCGACGCGTATATAGC
GTGACAATTGCTTTACGCAATGCAATGGGGGAAACAATATGA

Domains

Predicted by InterproScan.

• Type IV Pilus-assembly protein W (PilW) (181-327)

• Prokaryotic N-terminal methylation motif (N_methyl) (8-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilW	Acinetobacter baumannii D1279779	99.7	100	0.997