Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   SDEG_RS04810 Genome accession   NC_012891
Coordinates   958441..959106 (-) Length   221 a.a.
NCBI ID   WP_003060151.1    Uniprot ID   A0A9X9QR18
Organism   Streptococcus dysgalactiae subsp. equisimilis GGS_124     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 953441..964106
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SDEG_RS04780 (SDEG_0970) xerS 954030..955100 (+) 1071 WP_012766932.1 tyrosine recombinase XerS Machinery gene
  SDEG_RS04785 (SDEG_0971) - 955177..955617 (+) 441 WP_012766933.1 NusG domain II-containing protein -
  SDEG_RS04790 (SDEG_0972) - 955688..956638 (-) 951 WP_012766934.1 1,4-dihydroxy-2-naphthoate polyprenyltransferase -
  SDEG_RS04795 (SDEG_0973) - 956628..956945 (-) 318 Protein_909 FAD:protein FMN transferase -
  SDEG_RS04800 (SDEG_0974) - 956950..957438 (+) 489 WP_012766936.1 Gx transporter family protein -
  SDEG_RS04805 (SDEG_0975) - 957497..958444 (-) 948 WP_012766937.1 sensor histidine kinase -
  SDEG_RS04810 (SDEG_0976) braR 958441..959106 (-) 666 WP_003060151.1 response regulator transcription factor Regulator
  SDEG_RS04815 (SDEG_0977) - 959150..961105 (-) 1956 WP_012766938.1 ABC transporter permease -
  SDEG_RS04820 (SDEG_0978) - 961107..961859 (-) 753 WP_003057522.1 ABC transporter ATP-binding protein -
  SDEG_RS04825 (SDEG_0979) - 961896..962861 (-) 966 WP_003057518.1 S41 family peptidase -
  SDEG_RS04830 (SDEG_0980) - 963027..963509 (+) 483 WP_003057532.1 PASTA domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25638.37 Da        Isoelectric Point: 5.7900

>NTDB_id=30672 SDEG_RS04810 WP_003060151.1 958441..959106(-) (braR) [Streptococcus dysgalactiae subsp. equisimilis GGS_124]
MTKHDKIYIIEDDETILTLLHNHLSQSYDVKTVTNFRDIKQEVLAYQPDLILMDITLPFFNGFYWTTEIRKHLTIPIIFI
SSSNDEMDTVMALNMGGDDFVSKPFSLTILDAKIAAFLRRAQQFTSDDISLDQFKLHFDGTFSNGNEAVTLSPTEHKILT
ILMTRHQEIVSKEEILERLWENDNFIDHNTLNVNMTRLRKKIATIGFDRIHTIRGVGYLVK

Nucleotide


Download         Length: 666 bp        

>NTDB_id=30672 SDEG_RS04810 WP_003060151.1 958441..959106(-) (braR) [Streptococcus dysgalactiae subsp. equisimilis GGS_124]
ATGACAAAACATGATAAAATCTATATTATTGAAGATGATGAGACCATTTTAACCCTTCTTCACAATCACCTTAGCCAATC
TTATGATGTTAAGACGGTCACTAACTTTAGGGATATTAAACAGGAGGTACTTGCCTACCAGCCAGACCTTATCTTAATGG
ATATTACCCTACCTTTTTTCAATGGTTTTTACTGGACCACTGAAATTCGAAAACACTTAACGATTCCTATCATTTTTATT
TCCAGTAGTAATGATGAGATGGATACCGTTATGGCTCTTAATATGGGGGGAGATGACTTTGTCTCGAAACCTTTTTCGCT
AACCATTTTAGATGCTAAAATAGCAGCCTTTTTACGGCGTGCACAACAATTTACTAGTGACGACATTAGTCTCGATCAGT
TTAAACTCCATTTTGACGGTACCTTTTCAAATGGGAACGAAGCCGTTACCTTATCACCAACCGAACATAAAATCCTAACC
ATTTTAATGACTAGACATCAAGAAATTGTTTCTAAGGAAGAAATCTTGGAAAGACTTTGGGAAAATGATAATTTTATTGA
TCACAATACCCTGAATGTCAATATGACACGTCTACGCAAAAAAATTGCAACTATTGGTTTTGACCGTATTCATACTATAA
GAGGAGTGGGGTATCTCGTTAAATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-219)

Response regulator receiver domain (Response_reg)

(7-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9X9QR18

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.909

99.548

0.457

Multiple sequence alignment