Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | DXX91_RS12065 | Genome accession | NZ_CP031424 |
| Coordinates | 2464096..2464410 (-) | Length | 104 a.a. |
| NCBI ID | WP_015388003.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain B-4 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2459096..2469410
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXX91_RS12020 | sinI | 2459779..2459952 (+) | 174 | WP_003153105.1 | anti-repressor SinI family protein | Regulator |
| DXX91_RS12025 | sinR | 2459986..2460321 (+) | 336 | WP_003153104.1 | transcriptional regulator SinR | Regulator |
| DXX91_RS12030 | - | 2460369..2461154 (-) | 786 | WP_003153102.1 | TasA family protein | - |
| DXX91_RS12035 | - | 2461218..2461802 (-) | 585 | WP_012117977.1 | signal peptidase I | - |
| DXX91_RS12040 | tapA | 2461774..2462445 (-) | 672 | WP_115996533.1 | amyloid fiber anchoring/assembly protein TapA | - |
| DXX91_RS12045 | - | 2462704..2463033 (+) | 330 | WP_003153097.1 | DUF3889 domain-containing protein | - |
| DXX91_RS12050 | - | 2463073..2463252 (-) | 180 | WP_003153093.1 | YqzE family protein | - |
| DXX91_RS12055 | comGG | 2463309..2463686 (-) | 378 | WP_014305410.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| DXX91_RS12060 | comGF | 2463687..2464082 (-) | 396 | WP_115996535.1 | competence type IV pilus minor pilin ComGF | - |
| DXX91_RS12065 | comGE | 2464096..2464410 (-) | 315 | WP_015388003.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| DXX91_RS12070 | comGD | 2464394..2464831 (-) | 438 | WP_044053464.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| DXX91_RS12075 | comGC | 2464821..2465129 (-) | 309 | WP_003153087.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DXX91_RS12080 | comGB | 2465134..2466171 (-) | 1038 | WP_024085602.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DXX91_RS12085 | comGA | 2466158..2467228 (-) | 1071 | WP_003153083.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DXX91_RS12090 | - | 2467420..2468370 (-) | 951 | WP_003153082.1 | magnesium transporter CorA family protein | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 11844.85 Da Isoelectric Point: 6.9470
>NTDB_id=306687 DXX91_RS12065 WP_015388003.1 2464096..2464410(-) (comGE) [Bacillus velezensis strain B-4]
MLNGNKGFSTIETLSAMAIWLFLMTSIIPVWTGMLTDGLKIEDRQEAYQLLQKHISTYMMTGKKPPSPGVKWKEDGEYYK
VCAADRGEKEMCLSILKTDWLYAS
MLNGNKGFSTIETLSAMAIWLFLMTSIIPVWTGMLTDGLKIEDRQEAYQLLQKHISTYMMTGKKPPSPGVKWKEDGEYYK
VCAADRGEKEMCLSILKTDWLYAS
Nucleotide
Download Length: 315 bp
>NTDB_id=306687 DXX91_RS12065 WP_015388003.1 2464096..2464410(-) (comGE) [Bacillus velezensis strain B-4]
ATGCTAAACGGAAATAAAGGGTTCTCTACTATTGAAACACTATCAGCAATGGCCATTTGGCTGTTCCTTATGACGTCTAT
CATTCCGGTCTGGACGGGCATGCTGACAGATGGTCTGAAAATAGAAGATCGCCAGGAAGCGTACCAGCTTCTTCAGAAAC
ATATCAGCACTTATATGATGACCGGAAAAAAGCCGCCGTCTCCCGGTGTGAAGTGGAAGGAGGATGGTGAGTATTACAAA
GTGTGTGCGGCTGACCGCGGCGAAAAAGAAATGTGCCTCAGCATTCTCAAAACAGACTGGCTTTACGCTTCTTAA
ATGCTAAACGGAAATAAAGGGTTCTCTACTATTGAAACACTATCAGCAATGGCCATTTGGCTGTTCCTTATGACGTCTAT
CATTCCGGTCTGGACGGGCATGCTGACAGATGGTCTGAAAATAGAAGATCGCCAGGAAGCGTACCAGCTTCTTCAGAAAC
ATATCAGCACTTATATGATGACCGGAAAAAAGCCGCCGTCTCCCGGTGTGAAGTGGAAGGAGGATGGTGAGTATTACAAA
GTGTGTGCGGCTGACCGCGGCGAAAAAGAAATGTGCCTCAGCATTCTCAAAACAGACTGGCTTTACGCTTCTTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Bacillus subtilis subsp. subtilis str. 168 |
43.478 |
100 |
0.481 |