Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   DXX91_RS11835 Genome accession   NZ_CP031424
Coordinates   2425821..2426621 (-) Length   266 a.a.
NCBI ID   WP_003153177.1    Uniprot ID   I2C7K5
Organism   Bacillus velezensis strain B-4     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2420821..2431621
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DXX91_RS11810 - 2421370..2422002 (+) 633 WP_014418348.1 helix-turn-helix domain-containing protein -
  DXX91_RS19840 - 2422292..2422429 (+) 138 WP_014470646.1 hypothetical protein -
  DXX91_RS11815 - 2422523..2423641 (+) 1119 WP_088037465.1 NADH-dependent flavin oxidoreductase -
  DXX91_RS11820 - 2423767..2423979 (+) 213 WP_003153183.1 spore germination protein -
  DXX91_RS11825 - 2424105..2424317 (+) 213 WP_014305392.1 spore germination protein -
  DXX91_RS11830 alr 2424492..2425673 (+) 1182 WP_025852858.1 alanine racemase -
  DXX91_RS11835 spo0A 2425821..2426621 (-) 801 WP_003153177.1 sporulation transcription factor Spo0A Regulator
  DXX91_RS11840 spoIVB 2426902..2428182 (-) 1281 WP_115996524.1 SpoIVB peptidase -
  DXX91_RS11845 recN 2428346..2430076 (-) 1731 WP_115996526.1 DNA repair protein RecN Machinery gene
  DXX91_RS11850 argR 2430108..2430557 (-) 450 WP_003153173.1 transcriptional regulator ArgR -
  DXX91_RS11855 - 2430654..2431499 (-) 846 WP_015388017.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29630.11 Da        Isoelectric Point: 6.1630

>NTDB_id=306682 DXX91_RS11835 WP_003153177.1 2425821..2426621(-) (spo0A) [Bacillus velezensis strain B-4]
MEKIKVCVADDNRELVSLLSEYIEGQDDMEVIGVAYNGQECLSLFKDKNPDVLVLDIIMPHLDGLAVLERLRESELEKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNVSSVTHRAPSAQSSIIRSQPEPKRKNLDASITSII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=306682 DXX91_RS11835 WP_003153177.1 2425821..2426621(-) (spo0A) [Bacillus velezensis strain B-4]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTTGTAAGCCTGTTGAGTGAATATATAGAGGGACAGGA
TGATATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGTCTTTCTTTGTTTAAAGATAAGAATCCCGATGTGCTCG
TGTTAGACATTATCATGCCGCATCTGGACGGACTTGCGGTTTTGGAGCGTCTGCGTGAATCAGAGCTCGAGAAGCAGCCG
AACGTCATCATGCTGACGGCATTCGGTCAGGAAGACGTTACGAAAAAAGCCGTCGATTTAGGCGCATCCTATTTCATCCT
GAAGCCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTAAGCGGAAATGTCAGCAGTGTCACACACCGTGCCC
CGTCTGCGCAAAGCAGCATTATCCGCAGCCAGCCGGAGCCGAAGCGGAAAAATCTCGATGCCAGCATTACAAGCATTATC
CATGAGATCGGTGTGCCTGCCCATATCAAAGGCTATCTTTATTTGCGTGAAGCCATTTCCATGGTGTATAACGATATTGA
ACTCCTCGGCAGCATCACAAAAGTCCTTTATCCCGACATCGCCAAAAAATTCAACACGACCGCAAGCCGTGTAGAACGGG
CCATCCGCCACGCCATTGAAGTCGCATGGAGCAGGGGAAATATTGATTCCATTTCTTCACTGTTCGGATATACGGTAAGC
ATGACAAAAGCAAAACCAACCAACTCGGAATTCATCGCGATGGTTGCTGACAAGCTGAGATTGGAGCATAAAGCTTCGTA
A

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C7K5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

96.629

100

0.97

Multiple sequence alignment