Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   DXX91_RS07380 Genome accession   NZ_CP031424
Coordinates   1385306..1385770 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain B-4     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1380306..1390770
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DXX91_RS07360 - 1381632..1382606 (+) 975 Protein_1390 ATP-binding protein -
  DXX91_RS07365 - 1382632..1383801 (-) 1170 WP_007611083.1 aminotransferase A -
  DXX91_RS19795 - 1384002..1384163 (-) 162 WP_007409608.1 hypothetical protein -
  DXX91_RS07375 cheV 1384352..1385263 (+) 912 WP_014304917.1 chemotaxis protein CheV -
  DXX91_RS07380 kre 1385306..1385770 (-) 465 WP_003154622.1 YkyB family protein Regulator
  DXX91_RS07385 - 1385893..1387185 (-) 1293 WP_043867050.1 MFS transporter -
  DXX91_RS07390 - 1387261..1387755 (-) 495 WP_088037173.1 L,D-transpeptidase family protein -
  DXX91_RS07395 - 1387830..1388693 (-) 864 WP_025851492.1 metallophosphoesterase -
  DXX91_RS07400 fadH 1388837..1389601 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  DXX91_RS20060 - 1389712..1390257 (+) 546 Protein_1399 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=306673 DXX91_RS07380 WP_003154622.1 1385306..1385770(-) (kre) [Bacillus velezensis strain B-4]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=306673 DXX91_RS07380 WP_003154622.1 1385306..1385770(-) (kre) [Bacillus velezensis strain B-4]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment