Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | KAN02_RS01815 | Genome accession | NZ_CP036171 |
| Coordinates | 386456..386956 (+) | Length | 166 a.a. |
| NCBI ID | WP_002051742.1 | Uniprot ID | - |
| Organism | Acinetobacter nosocomialis strain KAN02 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 381456..391956
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KAN02_RS01780 (KAN02_01780) | - | 381474..383579 (-) | 2106 | WP_087606426.1 | RelA/SpoT family protein | - |
| KAN02_RS01785 (KAN02_01785) | - | 383618..383749 (-) | 132 | WP_102990545.1 | hypothetical protein | - |
| KAN02_RS01790 (KAN02_01790) | rpoZ | 383788..384066 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| KAN02_RS01795 (KAN02_01795) | gmk | 384139..384768 (-) | 630 | WP_002051739.1 | guanylate kinase | - |
| KAN02_RS01800 (KAN02_01800) | ispH | 384891..385841 (+) | 951 | WP_002051768.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| KAN02_RS01810 (KAN02_01810) | fimU | 386010..386459 (+) | 450 | WP_087606427.1 | GspH/FimT family pseudopilin | Machinery gene |
| KAN02_RS01815 (KAN02_01815) | pilV | 386456..386956 (+) | 501 | WP_002051742.1 | type IV pilus modification protein PilV | Machinery gene |
| KAN02_RS01820 (KAN02_01820) | pilW | 386958..387995 (+) | 1038 | WP_087606428.1 | PilW family protein | Machinery gene |
| KAN02_RS01825 (KAN02_01825) | - | 387992..388774 (+) | 783 | WP_087606429.1 | pilus assembly PilX N-terminal domain-containing protein | - |
Sequence
Protein
Download Length: 166 a.a. Molecular weight: 18212.63 Da Isoelectric Point: 4.8099
>NTDB_id=306645 KAN02_RS01815 WP_002051742.1 386456..386956(+) (pilV) [Acinetobacter nosocomialis strain KAN02]
MKSLGHQRGMGMIEILVALLILAIGILGFIALQYRALEASAESTSRVQAITLARDLAERMRVNRNSLTIYNQQLQDASKQ
TDYAKNCFQNNCTDTELADFDVAQVVKSASSYGMTMNMIACPQTNNRQCIYIAWGDTSATNGPGVGDCTQDTSYNNNSTC
VIMEAY
MKSLGHQRGMGMIEILVALLILAIGILGFIALQYRALEASAESTSRVQAITLARDLAERMRVNRNSLTIYNQQLQDASKQ
TDYAKNCFQNNCTDTELADFDVAQVVKSASSYGMTMNMIACPQTNNRQCIYIAWGDTSATNGPGVGDCTQDTSYNNNSTC
VIMEAY
Nucleotide
Download Length: 501 bp
>NTDB_id=306645 KAN02_RS01815 WP_002051742.1 386456..386956(+) (pilV) [Acinetobacter nosocomialis strain KAN02]
ATGAAGAGCCTTGGACACCAACGTGGTATGGGGATGATTGAAATTCTAGTTGCTTTGCTGATTTTGGCAATTGGTATTTT
AGGCTTTATTGCTCTGCAGTATAGAGCGTTAGAAGCAAGTGCAGAAAGTACATCACGGGTACAAGCAATTACATTAGCAC
GCGATCTTGCCGAGCGTATGAGAGTTAATCGTAATTCTTTAACTATATATAACCAGCAACTTCAAGATGCCAGTAAACAA
ACAGACTACGCTAAAAATTGCTTTCAAAACAATTGTACTGATACAGAGCTAGCTGATTTTGATGTTGCTCAGGTTGTAAA
AAGTGCATCTTCTTATGGTATGACTATGAATATGATTGCCTGTCCCCAAACTAACAATCGTCAATGTATTTATATTGCAT
GGGGAGATACTAGTGCAACGAATGGTCCTGGTGTAGGAGATTGTACTCAAGATACTTCATATAACAATAATTCAACATGT
GTGATTATGGAGGCCTATTAA
ATGAAGAGCCTTGGACACCAACGTGGTATGGGGATGATTGAAATTCTAGTTGCTTTGCTGATTTTGGCAATTGGTATTTT
AGGCTTTATTGCTCTGCAGTATAGAGCGTTAGAAGCAAGTGCAGAAAGTACATCACGGGTACAAGCAATTACATTAGCAC
GCGATCTTGCCGAGCGTATGAGAGTTAATCGTAATTCTTTAACTATATATAACCAGCAACTTCAAGATGCCAGTAAACAA
ACAGACTACGCTAAAAATTGCTTTCAAAACAATTGTACTGATACAGAGCTAGCTGATTTTGATGTTGCTCAGGTTGTAAA
AAGTGCATCTTCTTATGGTATGACTATGAATATGATTGCCTGTCCCCAAACTAACAATCGTCAATGTATTTATATTGCAT
GGGGAGATACTAGTGCAACGAATGGTCCTGGTGTAGGAGATTGTACTCAAGATACTTCATATAACAATAATTCAACATGT
GTGATTATGGAGGCCTATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Acinetobacter baylyi ADP1 |
41.341 |
100 |
0.446 |
| pilV | Acinetobacter baumannii D1279779 |
40.909 |
100 |
0.434 |