Detailed information NTG0306495

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: DLE02_RS09750
• Genome accession: NZ_CP031383
• Coordinates: 2020555..2021256 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain LUH 6011
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2015555..2026256

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DLE02_RS09715 (DLE02_01916)	kdsB	2016078..2016839 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
DLE02_RS09720 (DLE02_01917)	-	2016851..2017831 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
DLE02_RS09725 (DLE02_01918)	-	2017843..2018184 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
DLE02_RS09730 (DLE02_01919)	-	2018202..2018975 (+)	774	WP_000497298.1	TatD family hydrolase	-
DLE02_RS09735 (DLE02_01920)	-	2019013..2019621 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
DLE02_RS09740 (DLE02_01921)	-	2019631..2020185 (+)	555	WP_000841373.1	type II secretion system protein	-
DLE02_RS09745 (DLE02_01922)	xcpV	2020175..2020555 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
DLE02_RS09750 (DLE02_01923)	xcpW	2020555..2021256 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
DLE02_RS09755 (DLE02_01924)	gspK	2021256..2022215 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
DLE02_RS09760 (DLE02_01925)	-	2022446..2023042 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
DLE02_RS09765 (DLE02_01926)	ung	2023093..2023806 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
DLE02_RS09770 (DLE02_01927)	-	2023803..2024927 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
DLE02_RS09775 (DLE02_01928)	tadA	2024934..2025437 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
DLE02_RS09780 (DLE02_01929)	-	2025507..2025950 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=306495 DLE02_RS09750 WP_000594589.1 2020555..2021256(+) (xcpW) [Acinetobacter baumannii strain LUH 6011]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=306495 DLE02_RS09750 WP_000594589.1 2020555..2021256(+) (xcpW) [Acinetobacter baumannii strain LUH 6011]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996