Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | DMO12_RS17130 | Genome accession | NZ_CP031380 |
| Coordinates | 3592439..3592921 (-) | Length | 160 a.a. |
| NCBI ID | WP_001046420.1 | Uniprot ID | A0A7U3Y2Y6 |
| Organism | Acinetobacter baumannii ACICU | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3587439..3597921
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DMO12_RS17095 (DMO12_10188) | - | 3587545..3588579 (+) | 1035 | WP_012391995.1 | lipase secretion chaperone | - |
| DMO12_RS17100 (DMO12_10191) | - | 3588694..3589635 (+) | 942 | WP_085916958.1 | triacylglycerol lipase | - |
| DMO12_RS17105 (DMO12_10194) | rplS | 3589688..3590056 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| DMO12_RS17110 (DMO12_10197) | trmD | 3590265..3591005 (-) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| DMO12_RS17115 (DMO12_10200) | rimM | 3591051..3591599 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| DMO12_RS17120 (DMO12_10203) | rpsP | 3591619..3591870 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| DMO12_RS17125 (DMO12_10206) | pilE | 3592017..3592442 (-) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| DMO12_RS17130 (DMO12_10209) | pilY2 | 3592439..3592921 (-) | 483 | WP_001046420.1 | type IV pilin protein | Machinery gene |
| DMO12_RS17135 (DMO12_10212) | pilY1 | 3592934..3596788 (-) | 3855 | WP_000768964.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| DMO12_RS17140 (DMO12_10215) | pilX | 3596800..3597618 (-) | 819 | WP_000149377.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17548.77 Da Isoelectric Point: 8.4817
>NTDB_id=306456 DMO12_RS17130 WP_001046420.1 3592439..3592921(-) (pilY2) [Acinetobacter baumannii ACICU]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSASNGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSASNGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=306456 DMO12_RS17130 WP_001046420.1 3592439..3592921(-) (pilY2) [Acinetobacter baumannii ACICU]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTTCTAATGGTCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTTCTAATGGTCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
97.5 |
100 |
0.975 |
| comE | Acinetobacter baylyi ADP1 |
40.116 |
100 |
0.431 |