Detailed information NTG0306455

Bioinformatically predicted

Overview

• Name: pilE
• Type: Machinery gene
• Locus tag: DMO12_RS17125
• Genome accession: NZ_CP031380
• Coordinates: 3592017..3592442 (-)
• Length: 141 a.a.
• NCBI ID: WP_000788342.1
• Uniprot ID: N9K1U0
• Organism: Acinetobacter baumannii ACICU
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3587017..3597442

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DMO12_RS17095 (DMO12_10188)	-	3587545..3588579 (+)	1035	WP_012391995.1	lipase secretion chaperone	-
DMO12_RS17100 (DMO12_10191)	-	3588694..3589635 (+)	942	WP_085916958.1	triacylglycerol lipase	-
DMO12_RS17105 (DMO12_10194)	rplS	3589688..3590056 (-)	369	WP_000014562.1	50S ribosomal protein L19	-
DMO12_RS17110 (DMO12_10197)	trmD	3590265..3591005 (-)	741	WP_000464598.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
DMO12_RS17115 (DMO12_10200)	rimM	3591051..3591599 (-)	549	WP_000189236.1	ribosome maturation factor RimM	-
DMO12_RS17120 (DMO12_10203)	rpsP	3591619..3591870 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
DMO12_RS17125 (DMO12_10206)	pilE	3592017..3592442 (-)	426	WP_000788342.1	type IV pilin protein	Machinery gene
DMO12_RS17130 (DMO12_10209)	pilY2	3592439..3592921 (-)	483	WP_001046420.1	type IV pilin protein	Machinery gene
DMO12_RS17135 (DMO12_10212)	pilY1	3592934..3596788 (-)	3855	WP_000768964.1	PilC/PilY family type IV pilus protein	Machinery gene

Sequence

Protein

• Length: 141 a.a.
• Molecular weight: 15214.45 Da
• Isoelectric Point: 7.8464

>NTDB_id=306455 DMO12_RS17125 WP_000788342.1 3592017..3592442(-) (pilE) [Acinetobacter baumannii ACICU]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE

Nucleotide

• Length: 426 bp

>NTDB_id=306455 DMO12_RS17125 WP_000788342.1 3592017..3592442(-) (pilE) [Acinetobacter baumannii ACICU]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (26-115)

• Prokaryotic N-terminal methylation motif (N_methyl) (2-24)

3D structure

• AlphaFold DB: N9K1U0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilE	Acinetobacter baumannii D1279779	92.199	100	0.922
comF	Acinetobacter baylyi ADP1	52.143	99.291	0.518