Detailed information NTG0306446

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: DMO12_RS08325
• Genome accession: NZ_CP031380
• Coordinates: 1734205..1734906 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii ACICU
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1729205..1739906

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DMO12_RS08290 (DMO12_04920)	kdsB	1729728..1730489 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
DMO12_RS08295 (DMO12_04923)	-	1730501..1731481 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
DMO12_RS08300 (DMO12_04926)	-	1731493..1731834 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
DMO12_RS08305 (DMO12_04929)	-	1731852..1732625 (+)	774	WP_000497298.1	TatD family hydrolase	-
DMO12_RS08310 (DMO12_04932)	-	1732663..1733271 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
DMO12_RS08315 (DMO12_04935)	-	1733281..1733835 (+)	555	WP_000841373.1	type II secretion system protein	-
DMO12_RS08320 (DMO12_04938)	xcpV	1733825..1734205 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
DMO12_RS08325 (DMO12_04941)	xcpW	1734205..1734906 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
DMO12_RS08330 (DMO12_04944)	gspK	1734906..1735865 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
DMO12_RS08335 (DMO12_04947)	-	1736096..1736692 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
DMO12_RS08340 (DMO12_04950)	ung	1736743..1737456 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
DMO12_RS08345 (DMO12_04953)	-	1737453..1738577 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
DMO12_RS08350 (DMO12_04956)	tadA	1738584..1739087 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
DMO12_RS08355 (DMO12_04959)	-	1739157..1739600 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=306446 DMO12_RS08325 WP_000594589.1 1734205..1734906(+) (xcpW) [Acinetobacter baumannii ACICU]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=306446 DMO12_RS08325 WP_000594589.1 1734205..1734906(+) (xcpW) [Acinetobacter baumannii ACICU]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996