Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   DV178_RS12610 Genome accession   NZ_CP031335
Coordinates   2141765..2142226 (+) Length   153 a.a.
NCBI ID   WP_002216872.1    Uniprot ID   A0A2J1SH93
Organism   Neisseria meningitidis strain M25964     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 2136765..2147226
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV178_RS12585 - 2137892..2138101 (-) 210 WP_002212949.1 tautomerase family protein -
  DV178_RS12590 - 2138446..2139252 (+) 807 WP_002212946.1 DUF4198 domain-containing protein -
  DV178_RS12595 - 2139310..2140575 (-) 1266 WP_002221776.1 Glu/Leu/Phe/Val family dehydrogenase -
  DV178_RS12605 - 2140982..2141692 (+) 711 WP_002226230.1 phosphoglycolate phosphatase -
  DV178_RS12610 recX 2141765..2142226 (+) 462 WP_002216872.1 recombination regulator RecX Regulator
  DV178_RS13550 - 2142300..2142461 (+) 162 WP_002221773.1 hypothetical protein -
  DV178_RS12625 - 2142614..2143096 (+) 483 WP_002216871.1 acyl-CoA thioesterase -
  DV178_RS13950 - 2143106..2143237 (+) 132 WP_257535412.1 hypothetical protein -
  DV178_RS12630 - 2143456..2144703 (-) 1248 WP_002248084.1 M23 family metallopeptidase -
  DV178_RS12635 surE 2144959..2145705 (-) 747 WP_002220609.1 5'/3'-nucleotidase SurE -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17717.03 Da        Isoelectric Point: 10.0960

>NTDB_id=306049 DV178_RS12610 WP_002216872.1 2141765..2142226(+) (recX) [Neisseria meningitidis strain M25964]
MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEETSRNLLPDRSSEKQAAIAVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=306049 DV178_RS12610 WP_002216872.1 2141765..2142226(+) (recX) [Neisseria meningitidis strain M25964]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAAGTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAGGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTATGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAGAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAGCGAAAAACAGGCCGCCATAGCCGTGTTGCG
TAAAAAATTCAAACACCCCGCCGCCGACCTTAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGATTCGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACGGCTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2J1SH93

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

98.039

100

0.98

Multiple sequence alignment