Detailed information NTG0030603

Bioinformatically predicted

Overview

• Name: HI0659
• Type: Machinery gene
• Locus tag: SPCG_RS02905
• Genome accession: NC_010582
• Coordinates: 543611..543877 (+)
• Length: 88 a.a.
• NCBI ID: WP_001811621.1
• Uniprot ID: A0AAP5J8I9
• Organism: Streptococcus pneumoniae CGSP14
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	543038..543532	543611..543877	flank	79

Gene organization within MGE regions

Location: 543038..543877

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPCG_RS02900 (SPCG_0549)	-	543038..543526 (+)	489	Protein_550	transposase	-
SPCG_RS02905 (SPCG_0550)	HI0659	543611..543877 (+)	267	WP_001811621.1	helix-turn-helix domain-containing protein	Machinery gene

Sequence

Protein

• Length: 88 a.a.
• Molecular weight: 9560.13 Da
• Isoelectric Point: 4.8274

>NTDB_id=30603 SPCG_RS02905 WP_001811621.1 543611..543877(+) (HI0659) [Streptococcus pneumoniae CGSP14]
MEGCLSELFSKEEILESDMRVAIMSELIEARNKQGISQKKLEEVSGVSQPVIARMETGKTSPQLDTVLKVLASLGKTLAV
VPLEQGKS

Nucleotide

• Length: 267 bp

>NTDB_id=30603 SPCG_RS02905 WP_001811621.1 543611..543877(+) (HI0659) [Streptococcus pneumoniae CGSP14]
TTGGAAGGATGTCTATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTAGCTATCATGAGCGAGTT
GATTGAAGCCAGAAATAAGCAAGGAATCAGTCAGAAAAAGCTAGAGGAAGTCAGTGGAGTGAGTCAGCCTGTTATAGCTA
GGATGGAGACAGGTAAGACTAGTCCACAGTTGGACACAGTCTTAAAAGTCCTAGCTAGTCTAGGAAAGACACTAGCAGTC
GTTCCACTTGAACAGGGGAAAAGTTGA

Domains

Predicted by InterproScan.

• Helix-turn-helix (HTH_3) (28-79)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
HI0659	Haemophilus influenzae Rd KW20	61.039	87.5	0.534