Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   DV166_RS13020 Genome accession   NZ_CP031334
Coordinates   2212917..2213378 (+) Length   153 a.a.
NCBI ID   WP_002216872.1    Uniprot ID   A0A2J1SH93
Organism   Neisseria meningitidis strain M22293     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 2207917..2218378
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV166_RS12995 - 2209041..2209250 (-) 210 WP_002212949.1 4-oxalocrotonate tautomerase family protein -
  DV166_RS13000 - 2209595..2210401 (+) 807 WP_002212946.1 DUF4198 domain-containing protein -
  DV166_RS13005 - 2210459..2211727 (-) 1269 WP_115437189.1 Glu/Leu/Phe/Val dehydrogenase -
  DV166_RS13015 - 2212134..2212844 (+) 711 WP_002216874.1 phosphoglycolate phosphatase -
  DV166_RS13020 recX 2212917..2213378 (+) 462 WP_002216872.1 recombination regulator RecX Regulator
  DV166_RS14345 - 2213452..2213613 (+) 162 WP_002238113.1 hypothetical protein -
  DV166_RS13035 - 2213766..2214248 (+) 483 WP_002216871.1 acyl-CoA thioesterase -
  DV166_RS13040 - 2214455..2215702 (-) 1248 WP_002239875.1 M23 family metallopeptidase -
  DV166_RS13045 surE 2215958..2216704 (-) 747 WP_002225086.1 5'/3'-nucleotidase SurE -
  DV166_RS13050 - 2216721..2218277 (-) 1557 WP_002244180.1 TerC family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17717.03 Da        Isoelectric Point: 10.0960

>NTDB_id=306001 DV166_RS13020 WP_002216872.1 2212917..2213378(+) (recX) [Neisseria meningitidis strain M22293]
MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEETSRNLLPDRSSEKQAAIAVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=306001 DV166_RS13020 WP_002216872.1 2212917..2213378(+) (recX) [Neisseria meningitidis strain M22293]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAAGTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAGGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTATGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAGAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAGCGAAAAACAGGCCGCCATAGCCGTGTTGCG
TAAAAAATTCAAACACCCCGCCGCCGACCTCAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGATTCGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACGGCTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2J1SH93

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

98.039

100

0.98

Multiple sequence alignment