Detailed information NTG0305940

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: DV143_RS10895
• Genome accession: NZ_CP031333
• Coordinates: 1822594..1825686 (-)
• Length: 1030 a.a.
• NCBI ID: WP_115435289.1
• Uniprot ID: -
• Organism: Neisseria meningitidis strain M18727
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1817594..1830686

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DV143_RS10850	-	1817997..1818386 (-)	390	WP_002223015.1	endonuclease domain-containing protein	-
DV143_RS10860	-	1818947..1819084 (-)	138	WP_002214606.1	VOC family protein	-
DV143_RS10865	carA	1819130..1820263 (-)	1134	WP_002223013.1	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	-
DV143_RS10895	pilC	1822594..1825686 (-)	3093	WP_115435289.1	PilC family type IV pilus tip adhesin	Machinery gene
DV143_RS10910	apbC	1826640..1827719 (-)	1080	WP_041917712.1	iron-sulfur cluster carrier protein ApbC	-
DV143_RS10920	-	1828084..1828593 (+)	510	WP_002224078.1	protein disulfide oxidoreductase	-
DV143_RS10930	nadR	1828936..1829376 (+)	441	WP_115435290.1	MarR family adhesin repressor NadR	-
DV143_RS10935	hpaC	1829491..1829991 (+)	501	WP_002233027.1	4-hydroxyphenylacetate 3-monooxygenase, reductase component	-

Sequence

Protein

• Length: 1030 a.a.
• Molecular weight: 112461.18 Da
• Isoelectric Point: 9.7509

>NTDB_id=305940 DV143_RS10895 WP_115435289.1 1822594..1825686(-) (pilC) [Neisseria meningitidis strain M18727]
MNKTLKRRVFRHTALYAAILMFSHTGGGGAMAQTHQYAIIMNERKQPEVKSNVPSSIKDKDRKREYTHYKYKTGGGSVSF
NNSDELVSQQSGTAVFGTATYLPPYGKVSGFDDKRLKERGNAVNWIHTTHPGLIGYSYAGVVCRDSTGCPKLVYKTRFSF
DNPDLAKTGGGLDRHTEPSRDNSPIYKLKDHPWLGVSFNLGSENTVKNGNSFNKLISSFSENNNNQTIVSTTESHPISLG
DGQREHTAVVYYLNAKLHLLDKKGIKDITNKTVQLGVLRPSIDVRLQRNTGLAGLLNFWASWDIKDNGQIPVKLGLPEVK
AGRCINANNPNKSTKAPSPALTAPALWFGPVQNGKMEMYSASVSTYPDSSSSRIFLQNLKRKNDPNKPGRYSLADLSASE
IKSKEPTFTGRQTVIRLDKGVHQIKLKGNEVEGFKGNNGNDTFGIVSEGSFMPDDSEWKKVLLPWTVRAFNDDGQFNTVN
KEENNGKPKYSQKYRSRNNGKHERNLGDIVNSPIVAVGEYLATSANDGMVHIFKKSGGDDRNYSLKLSYIPGTMPRKDIQ
SQDSTLAKELRAFAEKSYVGDRYGVDGGFVLRQVEWKGQNHVFMFGAMGFGGRGAYALDLTKAENGDPTAVSLFDVKHDN
NGKNSNNSVQLGYTVGTPQIGKTHNGKYAAFLASGYATKDINNGDNKTALYVYDLESNNGTPIAKIEVPNGKGGLSSPTL
VDKDLDGTVDIAYAGDRGGSMYRFDLSGNNPTSWSARAIFSGNKPITSAPAISQLKDKRVVIFGTGSDLSEEDVDSKEIQ
HVYGIFDNETDTGTAKDGQGNGLLEQVLSEENKTLFLTDYKRSDGSGSKGWVVKLKEGQRVTVKPTVVLRTAFVTIRKYN
DGGCGAETAILGINTADGGKLTKKSARPIVPDTNTAVAQYSGHKKGTNGKSIPIGCMQKGNEIVCPNGYVYDKPVNVRYL
DEKKTDGFSTTADGDAGGSGIDPAGKRAGKNNRCFSQKGVRTLLMNDLDSLDITGPMCGMKRISWREVFY

Nucleotide

• Length: 3093 bp

>NTDB_id=305940 DV143_RS10895 WP_115435289.1 1822594..1825686(-) (pilC) [Neisseria meningitidis strain M18727]
ATGAATAAAACTTTAAAAAGGCGGGTTTTCCGCCATACCGCGCTTTATGCCGCCATCTTGATGTTTTCCCATACCGGCGG
GGGGGGGGCGATGGCGCAAACCCATCAATACGCTATTATCATGAACGAGCGAAAGCAGCCCGAGGTAAAGTCGAATGTGC
CATCTTCAATAAAGGACAAAGACAGGAAACGCGAATATACTCATTATAAGTACAAAACAGGAGGAGGCTCTGTCTCATTC
AACAATAGCGATGAGCTTGTTTCTCAACAAAGCGGTACTGCCGTTTTTGGCACAGCCACCTACCTGCCGCCCTACGGCAA
GGTTTCCGGTTTTGATGACAAAAGGCTGAAAGAGCGCGGCAATGCCGTTAATTGGATTCATACGACCCACCCAGGGTTGA
TAGGCTACAGCTACGCCGGTGTCGTATGCAGAGACAGCACAGGCTGTCCCAAACTTGTCTATAAAACCCGATTTTCCTTC
GATAATCCCGACTTGGCAAAAACAGGAGGCGGGCTGGATAGGCACACAGAGCCAAGCCGCGACAATTCGCCCATTTACAA
ATTGAAGGATCATCCATGGTTGGGCGTGTCTTTCAATTTGGGCAGCGAGAATACCGTCAAAAATGGCAACTCATTCAACA
AATTGATATCTTCTTTTAGTGAAAACAATAATAATCAAACCATCGTCTCTACGACAGAAAGCCACCCTATTTCCCTTGGC
GACGGGCAGCGCGAACATACCGCCGTGGTCTATTATCTGAACGCCAAACTGCACCTGCTGGACAAAAAAGGGATTAAAGA
TATCACCAACAAAACAGTGCAGTTGGGTGTCTTGAGGCCGAGCATCGATGTGCGGCTGCAAAGAAATACGGGGCTTGCCG
GCTTGCTAAATTTTTGGGCTAGTTGGGACATTAAAGATAACGGGCAGATTCCGGTCAAGCTCGGCCTGCCGGAAGTCAAA
GCAGGCCGCTGCATCAACGCAAATAACCCCAATAAGAGTACCAAAGCCCCTTCCCCCGCACTGACTGCCCCCGCGCTGTG
GTTCGGACCTGTGCAAAATGGTAAGATGGAGATGTATTCCGCTTCGGTTTCTACCTACCCCGACAGTTCGAGCAGCCGCA
TCTTCCTTCAAAATCTGAAAAGAAAAAACGACCCCAACAAACCCGGCCGCTATTCCCTCGCAGACTTGAGCGCGTCGGAG
ATTAAAAGTAAAGAGCCGACTTTCACAGGGCGGCAAACCGTCATCCGATTGGATAAAGGCGTACATCAGATCAAACTTAA
AGGCAATGAGGTCGAAGGTTTTAAGGGAAACAACGGCAACGACACTTTCGGCATTGTTAGTGAAGGGAGCTTCATGCCTG
ATGACAGCGAGTGGAAAAAAGTGCTGCTGCCTTGGACGGTTCGTGCTTTCAATGATGACGGTCAATTTAACACAGTCAAC
AAAGAAGAAAACAACGGCAAGCCAAAATACAGTCAAAAATACCGCAGCCGCAACAACGGCAAGCACGAGCGCAATTTGGG
CGACATCGTCAACAGCCCCATCGTGGCGGTCGGCGAGTATTTGGCTACTTCCGCCAACGACGGGATGGTGCATATCTTCA
AAAAAAGCGGCGGGGATGACCGCAACTATAGTCTGAAGCTCAGTTATATCCCGGGCACGATGCCGCGCAAGGATATTCAA
AGCCAAGACTCCACCCTTGCCAAAGAGCTGCGCGCCTTTGCCGAAAAAAGCTATGTGGGCGACCGCTACGGCGTGGACGG
CGGCTTTGTCTTGCGCCAAGTCGAATGGAAAGGGCAAAACCACGTGTTTATGTTCGGCGCGATGGGCTTTGGCGGCAGAG
GTGCATACGCCTTGGATTTGACCAAAGCCGAAAACGGTGACCCGACCGCCGTTTCCCTGTTTGATGTCAAACATGACAAT
AATGGCAAGAATAGCAATAATAGCGTGCAATTAGGCTACACCGTCGGCACGCCGCAAATCGGCAAAACCCACAACGGCAA
ATACGCCGCCTTCCTCGCCTCTGGTTATGCGACTAAAGACATTAACAACGGCGACAATAAAACCGCGCTGTATGTGTATG
ATTTGGAAAGCAACAACGGTACGCCGATTGCAAAAATCGAAGTACCCAACGGCAAGGGCGGGCTTTCGTCCCCCACGCTG
GTGGATAAAGATTTGGACGGCACGGTTGATATCGCCTATGCCGGCGATCGCGGCGGCAGTATGTACCGCTTTGATTTAAG
CGGCAACAACCCGACCAGTTGGTCTGCACGCGCCATTTTCAGCGGCAACAAACCGATTACTTCCGCGCCCGCCATTTCCC
AACTGAAAGACAAACGCGTGGTCATCTTCGGCACGGGCAGTGATTTGAGTGAGGAGGATGTGGACAGCAAAGAAATCCAA
CACGTTTACGGTATTTTTGACAATGAAACAGACACGGGTACGGCGAAAGACGGGCAGGGCAACGGGCTGCTCGAGCAAGT
GCTTAGTGAGGAAAATAAAACCTTATTCCTGACCGATTACAAGCGATCCGACGGATCGGGCAGTAAGGGGTGGGTAGTGA
AATTGAAGGAAGGACAGCGCGTTACCGTCAAACCGACCGTGGTATTGCGTACCGCCTTTGTAACCATCCGCAAATATAAC
GACGGCGGCTGCGGCGCGGAAACCGCCATTTTGGGCATCAATACCGCCGACGGCGGCAAGCTGACCAAGAAAAGCGCGCG
CCCGATTGTGCCGGACACCAATACGGCTGTCGCGCAATATTCCGGCCATAAGAAAGGCACCAACGGCAAATCCATCCCTA
TAGGTTGTATGCAAAAAGGCAATGAAATCGTCTGCCCGAACGGATATGTTTACGACAAACCGGTTAATGTGCGTTATCTG
GATGAAAAGAAAACAGACGGATTTTCAACAACGGCAGACGGCGATGCGGGCGGCAGCGGTATAGACCCCGCCGGCAAGCG
TGCCGGCAAAAACAACCGCTGCTTCTCCCAAAAAGGGGTGCGCACCCTGCTGATGAACGATTTGGACAGCTTGGACATTA
CCGGCCCGATGTGCGGTATGAAACGAATCAGCTGGCGTGAAGTCTTCTACTGA

Domains

Predicted by InterproScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (506-838)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	77.778	100	0.788