Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   DV163_RS00180 Genome accession   NZ_CP031330
Coordinates   22996..23457 (-) Length   153 a.a.
NCBI ID   WP_002225089.1    Uniprot ID   Q9JYQ3
Organism   Neisseria meningitidis strain M21955     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 17996..28457
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV163_RS00155 surE 19516..20262 (+) 747 WP_002225086.1 5'/3'-nucleotidase SurE -
  DV163_RS00160 - 20518..21765 (+) 1248 WP_002225087.1 M23 family metallopeptidase -
  DV163_RS00165 - 22126..22608 (-) 483 WP_002225088.1 acyl-CoA thioesterase -
  DV163_RS13585 - 22761..22922 (-) 162 WP_002244178.1 hypothetical protein -
  DV163_RS00180 recX 22996..23457 (-) 462 WP_002225089.1 recombination regulator RecX Regulator
  DV163_RS00185 - 23525..24232 (-) 708 WP_002225090.1 phosphoglycolate phosphatase -
  DV163_RS00195 - 24634..25899 (+) 1266 WP_002244177.1 Glu/Leu/Phe/Val dehydrogenase -
  DV163_RS00200 - 25957..26763 (-) 807 WP_002225093.1 DUF4198 domain-containing protein -
  DV163_RS00205 - 27108..27317 (+) 210 WP_002212949.1 4-oxalocrotonate tautomerase family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17717.07 Da        Isoelectric Point: 9.9314

>NTDB_id=305812 DV163_RS00180 WP_002225089.1 22996..23457(-) (recX) [Neisseria meningitidis strain M21955]
MKPQKSLRARAMDILSRQELSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEETSRNLLPDRSSEKLAAIAVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDDGWEEDC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=305812 DV163_RS00180 WP_002225089.1 22996..23457(-) (recX) [Neisseria meningitidis strain M21955]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAACTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAGGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTATGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAGAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAGCGAAAAACTGGCCGCCATAGCCGTGTTGCG
TAAAAAATTCAAACATCCGGCCGCCGACCTTAAAGAAAAACAAAAACAGGCACGCTTCCTCGCCTATCGCGGTTTTGATG
CCGATACCGTTCAGACGGCATTGAAACATGCCTGGGATGACGGCTGGGAGGAAGACTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9JYQ3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

94.771

100

0.948

Multiple sequence alignment