Detailed information
Bioinformatically predicted
Overview
| Name | radA | Type | Machinery gene |
| Locus tag | DV167_RS05475 | Genome accession | NZ_CP031329 |
| Coordinates | 937791..939170 (-) | Length | 459 a.a. |
| NCBI ID | WP_002235637.1 | Uniprot ID | Q9K040 |
| Organism | Neisseria meningitidis strain M22425 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 932791..944170
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DV167_RS05460 | - | 936435..936794 (+) | 360 | WP_002219522.1 | rhodanese-like domain-containing protein | - |
| DV167_RS05465 | - | 937036..937515 (+) | 480 | WP_002222722.1 | DUF302 domain-containing protein | - |
| DV167_RS05475 | radA | 937791..939170 (-) | 1380 | WP_002235637.1 | DNA repair protein RadA | Machinery gene |
| DV167_RS05480 | hemE | 939359..940423 (-) | 1065 | WP_002236851.1 | uroporphyrinogen decarboxylase | - |
| DV167_RS05485 | - | 940498..941715 (-) | 1218 | WP_002213996.1 | heme biosynthesis protein HemY | - |
| DV167_RS05490 | - | 941712..942986 (-) | 1275 | WP_082302069.1 | uroporphyrinogen-III C-methyltransferase | - |
| DV167_RS05495 | - | 943061..943822 (-) | 762 | WP_002251221.1 | uroporphyrinogen-III synthase | - |
Sequence
Protein
Download Length: 459 a.a. Molecular weight: 49533.03 Da Isoelectric Point: 7.3292
>NTDB_id=305782 DV167_RS05475 WP_002235637.1 937791..939170(-) (radA) [Neisseria meningitidis strain M22425]
MAKTLKTLYQCTECGGTSPKWQGKCPHCGEWNTLQESLAAPEPKNARFQSWAADTSTVQSLSAVTATEVPRNPTGMGELD
RVLGGGLVDGAVILLGGDPGIGKSTLLLQTIAKMAQSRKVLYVSGEESAQQVALRAQRLELPTDGVNLLAEIRMEAIQAA
LKQHQPEVVVIDSIQTMYSDQITSAPGSVSQVRECAAQLTRMAKQMGIAMILVGHVTKDGAIAGPRVLEHMVDTVLYFEG
DQHSNYRMIRAIKNRFGAANELGVFAMTENGLKGVSNPSAIFLASYRDDTPGSCVLVTQEGSRPLLVEIQALVDDAHGFT
PKRLTVGLEQNRLAMLLAVLNRHGGIACFDQDVFLNAVGGVKIGEPAADLAVILAMLSSFRNRPMPEKTVVFGEIGLSGE
VRPVARGQERLKEAEKLGFKRAIVPKANMPRNAKEFPNLKIYGVSSLQEAIDICRDSRE
MAKTLKTLYQCTECGGTSPKWQGKCPHCGEWNTLQESLAAPEPKNARFQSWAADTSTVQSLSAVTATEVPRNPTGMGELD
RVLGGGLVDGAVILLGGDPGIGKSTLLLQTIAKMAQSRKVLYVSGEESAQQVALRAQRLELPTDGVNLLAEIRMEAIQAA
LKQHQPEVVVIDSIQTMYSDQITSAPGSVSQVRECAAQLTRMAKQMGIAMILVGHVTKDGAIAGPRVLEHMVDTVLYFEG
DQHSNYRMIRAIKNRFGAANELGVFAMTENGLKGVSNPSAIFLASYRDDTPGSCVLVTQEGSRPLLVEIQALVDDAHGFT
PKRLTVGLEQNRLAMLLAVLNRHGGIACFDQDVFLNAVGGVKIGEPAADLAVILAMLSSFRNRPMPEKTVVFGEIGLSGE
VRPVARGQERLKEAEKLGFKRAIVPKANMPRNAKEFPNLKIYGVSSLQEAIDICRDSRE
Nucleotide
Download Length: 1380 bp
>NTDB_id=305782 DV167_RS05475 WP_002235637.1 937791..939170(-) (radA) [Neisseria meningitidis strain M22425]
ATGGCAAAAACGCTTAAAACCCTTTACCAATGCACCGAATGCGGCGGCACCTCCCCGAAATGGCAAGGCAAATGCCCGCA
TTGCGGCGAGTGGAACACGCTTCAGGAAAGCCTTGCCGCGCCCGAGCCGAAAAACGCCCGTTTCCAATCTTGGGCGGCGG
ACACTTCGACCGTCCAATCCCTCTCCGCCGTTACCGCCACCGAAGTGCCGCGCAATCCGACCGGTATGGGCGAACTCGAC
CGCGTATTGGGCGGCGGTTTGGTCGATGGTGCGGTCATCCTGCTCGGCGGCGACCCCGGCATCGGCAAATCCACGCTGCT
GTTGCAAACCATCGCCAAAATGGCGCAAAGCCGTAAAGTGCTATACGTTTCCGGCGAAGAATCCGCCCAACAAGTCGCCC
TGCGCGCGCAGCGTTTGGAACTGCCGACCGACGGCGTAAACCTTCTTGCCGAAATCCGCATGGAAGCGATTCAGGCGGCC
TTGAAACAGCATCAGCCCGAAGTTGTCGTCATCGACTCTATCCAAACCATGTATTCCGACCAAATCACGTCCGCCCCCGG
CTCCGTGTCGCAGGTGCGCGAGTGTGCCGCCCAACTGACGCGCATGGCGAAACAGATGGGCATCGCCATGATACTGGTCG
GACACGTGACCAAAGACGGCGCGATTGCCGGCCCGCGCGTGCTGGAACACATGGTTGATACCGTGCTGTATTTCGAGGGC
GACCAACATTCCAACTACCGCATGATACGCGCCATCAAAAACCGCTTCGGCGCGGCAAACGAACTGGGCGTGTTCGCGAT
GACGGAAAACGGTTTGAAAGGTGTGTCCAACCCGTCCGCCATCTTCCTCGCCAGCTACCGCGACGATACGCCCGGCTCGT
GCGTTTTGGTTACACAGGAAGGCAGCCGCCCGCTTTTGGTCGAAATTCAGGCATTGGTCGATGACGCGCACGGCTTCACG
CCCAAACGCCTCACCGTCGGACTGGAACAAAACCGTCTTGCGATGCTGCTTGCCGTGTTAAACCGCCACGGCGGCATCGC
CTGTTTCGATCAGGATGTGTTCCTCAACGCCGTCGGCGGCGTGAAAATCGGCGAACCGGCGGCGGATTTGGCGGTCATCC
TCGCGATGCTTTCCAGCTTCCGCAACCGCCCTATGCCTGAAAAAACCGTGGTTTTCGGCGAGATCGGCTTAAGCGGCGAA
GTCCGCCCCGTCGCACGCGGGCAAGAGCGGCTCAAAGAAGCGGAAAAACTCGGCTTCAAACGCGCCATCGTCCCCAAAGC
CAATATGCCGCGCAACGCCAAAGAGTTTCCGAACCTGAAAATCTACGGCGTTTCGAGTTTGCAGGAAGCCATCGATATTT
GCCGCGACAGCAGGGAATAA
ATGGCAAAAACGCTTAAAACCCTTTACCAATGCACCGAATGCGGCGGCACCTCCCCGAAATGGCAAGGCAAATGCCCGCA
TTGCGGCGAGTGGAACACGCTTCAGGAAAGCCTTGCCGCGCCCGAGCCGAAAAACGCCCGTTTCCAATCTTGGGCGGCGG
ACACTTCGACCGTCCAATCCCTCTCCGCCGTTACCGCCACCGAAGTGCCGCGCAATCCGACCGGTATGGGCGAACTCGAC
CGCGTATTGGGCGGCGGTTTGGTCGATGGTGCGGTCATCCTGCTCGGCGGCGACCCCGGCATCGGCAAATCCACGCTGCT
GTTGCAAACCATCGCCAAAATGGCGCAAAGCCGTAAAGTGCTATACGTTTCCGGCGAAGAATCCGCCCAACAAGTCGCCC
TGCGCGCGCAGCGTTTGGAACTGCCGACCGACGGCGTAAACCTTCTTGCCGAAATCCGCATGGAAGCGATTCAGGCGGCC
TTGAAACAGCATCAGCCCGAAGTTGTCGTCATCGACTCTATCCAAACCATGTATTCCGACCAAATCACGTCCGCCCCCGG
CTCCGTGTCGCAGGTGCGCGAGTGTGCCGCCCAACTGACGCGCATGGCGAAACAGATGGGCATCGCCATGATACTGGTCG
GACACGTGACCAAAGACGGCGCGATTGCCGGCCCGCGCGTGCTGGAACACATGGTTGATACCGTGCTGTATTTCGAGGGC
GACCAACATTCCAACTACCGCATGATACGCGCCATCAAAAACCGCTTCGGCGCGGCAAACGAACTGGGCGTGTTCGCGAT
GACGGAAAACGGTTTGAAAGGTGTGTCCAACCCGTCCGCCATCTTCCTCGCCAGCTACCGCGACGATACGCCCGGCTCGT
GCGTTTTGGTTACACAGGAAGGCAGCCGCCCGCTTTTGGTCGAAATTCAGGCATTGGTCGATGACGCGCACGGCTTCACG
CCCAAACGCCTCACCGTCGGACTGGAACAAAACCGTCTTGCGATGCTGCTTGCCGTGTTAAACCGCCACGGCGGCATCGC
CTGTTTCGATCAGGATGTGTTCCTCAACGCCGTCGGCGGCGTGAAAATCGGCGAACCGGCGGCGGATTTGGCGGTCATCC
TCGCGATGCTTTCCAGCTTCCGCAACCGCCCTATGCCTGAAAAAACCGTGGTTTTCGGCGAGATCGGCTTAAGCGGCGAA
GTCCGCCCCGTCGCACGCGGGCAAGAGCGGCTCAAAGAAGCGGAAAAACTCGGCTTCAAACGCGCCATCGTCCCCAAAGC
CAATATGCCGCGCAACGCCAAAGAGTTTCCGAACCTGAAAATCTACGGCGTTTCGAGTTTGCAGGAAGCCATCGATATTT
GCCGCGACAGCAGGGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| radA | Bacillus subtilis subsp. subtilis str. 168 |
50.33 |
99.129 |
0.499 |
| radA | Streptococcus pneumoniae Rx1 |
47.566 |
98.475 |
0.468 |
| radA | Streptococcus pneumoniae D39 |
47.566 |
98.475 |
0.468 |
| radA | Streptococcus pneumoniae R6 |
47.566 |
98.475 |
0.468 |
| radA | Streptococcus pneumoniae TIGR4 |
47.566 |
98.475 |
0.468 |
| radA | Streptococcus mitis SK321 |
47.45 |
98.257 |
0.466 |
| radA | Streptococcus mitis NCTC 12261 |
47.45 |
98.257 |
0.466 |