Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   DV144_RS12810 Genome accession   NZ_CP031328
Coordinates   2149409..2151451 (-) Length   680 a.a.
NCBI ID   WP_115430875.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M18755     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2144409..2156451
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV144_RS12770 - 2144744..2145103 (-) 360 WP_061693024.1 hypothetical protein -
  DV144_RS14205 - 2145308..2145514 (-) 207 WP_002238305.1 hypothetical protein -
  DV144_RS12785 - 2145523..2146671 (-) 1149 Protein_2088 cupin domain-containing protein -
  DV144_RS12795 - 2146924..2147217 (+) 294 WP_002214458.1 hypothetical protein -
  DV144_RS12800 argC 2147214..2148257 (+) 1044 WP_002241171.1 N-acetyl-gamma-glutamyl-phosphate reductase -
  DV144_RS13630 - 2148231..2148479 (-) 249 WP_153308319.1 hypothetical protein -
  DV144_RS12810 recG 2149409..2151451 (-) 2043 WP_115430875.1 ATP-dependent DNA helicase RecG Machinery gene
  DV144_RS12815 secB 2151537..2151980 (-) 444 WP_002229859.1 protein-export chaperone SecB -
  DV144_RS12820 grxC 2152001..2152258 (-) 258 WP_002221441.1 glutaredoxin 3 -
  DV144_RS12825 rng 2152472..2153965 (+) 1494 WP_002214463.1 ribonuclease G -
  DV144_RS12830 - 2153929..2155251 (-) 1323 WP_306807841.1 ATP-binding protein -
  DV144_RS12835 - 2155247..2155422 (-) 176 Protein_2097 response regulator -

Sequence

Protein


Download         Length: 680 a.a.        Molecular weight: 74991.03 Da        Isoelectric Point: 7.3732

>NTDB_id=305755 DV144_RS12810 WP_115430875.1 2149409..2151451(-) (recG) [Neisseria meningitidis strain M18755]
MMSPETQKQLKITDVSVKKLDKLNLHTAWDLVLHLPLRYEDETHIMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQI
ADDSGSVLFLRFIHFYASHQKQTAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
QTALDVTPLHDTLPDALLCRLKLPHLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKFDELLAQQLSMRLARQKRIGGTA
AALGGDGTLTQALRQALPFALTDAQEKVVSEICRDMAQTHPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEI
LAEQHFIKFKQWLEPLGIEVVRLFGSLRKKAKDEAKAKLADGSVKIAVGTHALFSDDVEFQNLGLVIVDEQHRFGVAQRL
ALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRLVNNVRRAEVEGFVLGTCRKGRQAYWVCPLI
EESETLQLQTAAETLARLQTALPELNIGLVHGRMKAAEKAEVMARFSSGGLNVLVATTVIEVGVDVPNAALMVIEHAERM
GLAQLHQLRGRVGRGAAESVCVLLFAEPLGELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFAKLEE
DLHLLEQAREIAPILIEQNPEIVEAHLARWLSGREGYLGV

Nucleotide


Download         Length: 2043 bp        

>NTDB_id=305755 DV144_RS12810 WP_115430875.1 2149409..2151451(-) (recG) [Neisseria meningitidis strain M18755]
ATGATGTCGCCCGAAACCCAGAAACAGCTCAAAATCACCGATGTTTCCGTCAAGAAGCTCGACAAACTCAATCTTCATAC
CGCGTGGGATTTGGTGTTGCACCTGCCGCTGCGTTACGAGGACGAGACGCACATTATGCCGATTAAGGACGCGCCGATCG
GCGTGCCGTGCCAGGTCGAGGGCGAGGTTATCCATCAGGAAGTAACGTTCAAACCGCGCAAGCAGCTGATTGTCCAAATT
GCCGACGACTCCGGCAGCGTCCTTTTCCTGCGCTTCATCCACTTTTACGCCAGCCATCAGAAGCAGACGGCGGTCGGCAA
ACGCATCCGCGCCGTGGGCGAAATCAAACACGGCTTTTACGGCGACGAGATGATTCATCCCAAAATCCGCGATGCCGAGG
GCGGCGGTTTGGCGGAAAGCCTCACGCCGGTTTACCCGACCGTAAACGGTTTGAACCAGCCCACTTTGCGCCGTATTATT
CAGACGGCGTTGGACGTTACGCCGCTGCACGACACGCTGCCCGATGCCCTGCTGTGCCGTCTGAAGCTGCCACACCTCGC
CGAAAGCCTGCGTCTTTTGCATTCGCCGCCGCCGAGTTTCACGATTCATCAGCTTTCAGACGGCACGCTGCCTGCATGGC
AACGGCTCAAATTCGATGAACTTTTGGCGCAACAGCTTTCGATGCGCTTGGCGCGACAGAAGCGTATCGGCGGCACGGCG
GCGGCATTGGGCGGCGACGGCACATTGACCCAAGCCCTGCGCCAAGCCCTGCCGTTTGCCCTGACCGATGCGCAAGAAAA
AGTTGTTTCCGAAATCTGCCGCGATATGGCGCAAACGCACCCGATGCACCGCCTGCTGCAAGGCGATGTCGGCAGTGGCA
AAACCATCGTCGCCGCCTTGTCCGCGCTGACCGCCATCGAATCCGGCGCGCAGGTGGCTGTAATGGCACCGACCGAAATC
CTTGCCGAACAACATTTTATTAAATTTAAACAATGGCTCGAACCTTTGGGCATTGAAGTTGTCCGCCTTTTTGGCAGTTT
GCGCAAAAAAGCCAAAGACGAAGCCAAAGCCAAACTCGCCGACGGCAGCGTCAAAATCGCCGTCGGCACGCACGCCCTGT
TTTCAGACGACGTCGAGTTTCAAAATCTAGGCTTGGTGATTGTGGACGAACAACACCGCTTTGGTGTTGCCCAACGCCTC
GCCCTCAAAAACAAAGGGCGCGAAGTCCATCAGCTGATGATGTCCGCCACGCCCATCCCGCGCACGCTTGCGATGAGTTT
TTTCGCCGATTTGGACGTGTCCGTCATCGACGAATTGCCGCCCGGGCGCACACCGATTAAAACGCGCCTCGTCAACAACG
TCCGCCGCGCTGAAGTCGAAGGCTTTGTCCTCGGTACTTGCCGAAAAGGGCGGCAGGCGTATTGGGTTTGCCCGCTGATT
GAAGAAAGCGAAACCCTGCAACTGCAAACCGCCGCCGAAACCCTCGCCCGGCTTCAGACGGCATTGCCCGAACTCAATAT
CGGACTGGTACACGGGCGCATGAAGGCCGCCGAAAAGGCCGAAGTGATGGCGCGGTTTTCTTCGGGGGGGCTGAACGTCT
TGGTCGCCACCACCGTCATCGAAGTCGGCGTAGATGTGCCCAATGCCGCCCTGATGGTCATCGAACACGCCGAGCGCATG
GGCTTGGCGCAGCTGCACCAATTACGCGGTCGGGTCGGGCGCGGCGCGGCAGAAAGCGTGTGCGTCCTCCTGTTTGCCGA
ACCCTTGGGCGAACTCGCCAAAGCGCGGCTGAAAGTCATCTACGAACACACCGACGGCTTTGAAATCGCCCGCCAAGACC
TCAACATCCGCGGCCCCGGCGAATTTCTCGGTGCGCGTCAAAGCGGCGTGCCTATGCTGCGTTTCGCCAAGCTCGAAGAA
GACTTACACCTTTTGGAACAAGCGCGCGAAATCGCCCCGATACTGATTGAGCAAAACCCCGAAATCGTCGAAGCGCATTT
GGCAAGGTGGCTTTCCGGCAGGGAAGGGTATTTGGGCGTGTGA

Domains

Predicted by InterproScan.

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(604-666)

DEAD/DEAH box helicase (DEAD)

(262-421)

Helicase conserved C-terminal domain (Helicase_C)

(468-575)

RecG wedge domain (RecG_wedge)

(17-164)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

98.529

100

0.985

Multiple sequence alignment