Detailed information
Bioinformatically predicted
Overview
| Name | recC | Type | Machinery gene |
| Locus tag | DV115_RS03350 | Genome accession | NZ_CP031325 |
| Coordinates | 643819..647028 (-) | Length | 1069 a.a. |
| NCBI ID | WP_003752312.1 | Uniprot ID | - |
| Organism | Neisseria polysaccharea strain M18661 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 638819..652028
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DV115_RS03340 | mtrC | 641629..642867 (-) | 1239 | WP_003752315.1 | multidrug efflux RND transporter periplasmic adaptor subunit MtrC | - |
| DV115_RS03345 | mtrR | 643115..643747 (+) | 633 | WP_025456792.1 | multidrug efflux system transcriptional repressor MtrR | - |
| DV115_RS03350 | recC | 643819..647028 (-) | 3210 | WP_003752312.1 | exodeoxyribonuclease V subunit gamma | Machinery gene |
| DV115_RS03355 | - | 647130..648539 (-) | 1410 | WP_003752308.1 | PepSY-associated TM helix domain-containing protein | - |
| DV115_RS03360 | ccoP | 648805..650136 (-) | 1332 | WP_003752304.1 | cytochrome-c oxidase, cbb3-type subunit III | - |
| DV115_RS03365 | - | 650160..650330 (-) | 171 | WP_003752303.1 | CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone | - |
| DV115_RS03370 | ccoO | 650335..650946 (-) | 612 | WP_003752300.1 | cytochrome-c oxidase, cbb3-type subunit II | - |
Sequence
Protein
Download Length: 1069 a.a. Molecular weight: 120803.51 Da Isoelectric Point: 4.8439
>NTDB_id=305635 DV115_RS03350 WP_003752312.1 643819..647028(-) (recC) [Neisseria polysaccharea strain M18661]
MFYLYQSNRLETLAALFAHIQKFKPLKSVLQPEQIIVQSQGMRRYLNTCLARDLGVAANLAFSLPAGLTWKLMKKLIPGI
PELSPFAPEVMRWRLLDLFRSAEFQNGAEFEDVRRVLQNYLGSGESADYQLAGQLADIFDQYLVYRPQWIDAWQQGRILG
LGDDEIWQSKLWRYLDDGRQSAPHRVALWEKLLAALDKDKLPERYFVFGISTMAPMYLQLLHKLSEHCDVFVFALNPSGM
HWGNVIEAAQILKGGGDPDLTQTGHPLLASLGKQGRDFFDFLNEMEIEEETPVFEEGGRDTLLHALQTDIQNLKMPSETA
GSVNTGDGSIRIVSAHSPLRELQILKDKLLKILHEHPDWQPHYIAVLTPNIESYTPFIEAVFGQAQPGAQALPYSVSDVK
ISRRQPLFHALSCLFDLLESRFEVDKVLVLLETAPVLRRFGLTEDDLPLLHDMVADLNVHWGLDGEMRGGTDQLFTWKQA
VERMILGWMLPEGGNPMWQDVSAWYADVNQTVMFGRFAAFIESLTDIVRIWRQPATVGEWVARCRDLLEILFQTGADDQK
AVQNLENEWVKWQEESTLAGFIGQLPQQTVIRHIRRFLDSESEAGFLRGGITFCSMVPMRSLPFKVICLLGLNDGDFPRN
TKAAVFDLIAKHPAKGDRARRDDDRYLFLEALISAREILYLSYIGRDIRKDEELAPSSLLGELIDTVAAMTGTNSRQLAQ
NWIEQHPLQAFSRRYFQEGGRSDGIFGTRTDYAAALGQTPEPPQPFFDQSVENAEPVAEIGQDEFIRFWRNPVKVWLQQQ
LAWSEPHIGEAWEPAEPFEPQHADQIAETYIEARREGRDFAQTAARIVAESLLPSGELGRLWQQDFQTAAKQIDTAVLNS
PKLPPLSYAIPSDGQILKGSLSNLYQCGQVFYAYGKPNAPQRVAFLLEHLIFCAVMPSEAETRQTFIVQSGETEILAEIA
QDRALQLLSEWMAFFNIGQNRPLPFFAKTSLAAAEAFAQKQDWEAALKKAQTAYHGNKVSKGQKDYTEVALVFGNASQNP
LEQPLFENLVRLLADTLAAAEKKEETGEA
MFYLYQSNRLETLAALFAHIQKFKPLKSVLQPEQIIVQSQGMRRYLNTCLARDLGVAANLAFSLPAGLTWKLMKKLIPGI
PELSPFAPEVMRWRLLDLFRSAEFQNGAEFEDVRRVLQNYLGSGESADYQLAGQLADIFDQYLVYRPQWIDAWQQGRILG
LGDDEIWQSKLWRYLDDGRQSAPHRVALWEKLLAALDKDKLPERYFVFGISTMAPMYLQLLHKLSEHCDVFVFALNPSGM
HWGNVIEAAQILKGGGDPDLTQTGHPLLASLGKQGRDFFDFLNEMEIEEETPVFEEGGRDTLLHALQTDIQNLKMPSETA
GSVNTGDGSIRIVSAHSPLRELQILKDKLLKILHEHPDWQPHYIAVLTPNIESYTPFIEAVFGQAQPGAQALPYSVSDVK
ISRRQPLFHALSCLFDLLESRFEVDKVLVLLETAPVLRRFGLTEDDLPLLHDMVADLNVHWGLDGEMRGGTDQLFTWKQA
VERMILGWMLPEGGNPMWQDVSAWYADVNQTVMFGRFAAFIESLTDIVRIWRQPATVGEWVARCRDLLEILFQTGADDQK
AVQNLENEWVKWQEESTLAGFIGQLPQQTVIRHIRRFLDSESEAGFLRGGITFCSMVPMRSLPFKVICLLGLNDGDFPRN
TKAAVFDLIAKHPAKGDRARRDDDRYLFLEALISAREILYLSYIGRDIRKDEELAPSSLLGELIDTVAAMTGTNSRQLAQ
NWIEQHPLQAFSRRYFQEGGRSDGIFGTRTDYAAALGQTPEPPQPFFDQSVENAEPVAEIGQDEFIRFWRNPVKVWLQQQ
LAWSEPHIGEAWEPAEPFEPQHADQIAETYIEARREGRDFAQTAARIVAESLLPSGELGRLWQQDFQTAAKQIDTAVLNS
PKLPPLSYAIPSDGQILKGSLSNLYQCGQVFYAYGKPNAPQRVAFLLEHLIFCAVMPSEAETRQTFIVQSGETEILAEIA
QDRALQLLSEWMAFFNIGQNRPLPFFAKTSLAAAEAFAQKQDWEAALKKAQTAYHGNKVSKGQKDYTEVALVFGNASQNP
LEQPLFENLVRLLADTLAAAEKKEETGEA
Nucleotide
Download Length: 3210 bp
>NTDB_id=305635 DV115_RS03350 WP_003752312.1 643819..647028(-) (recC) [Neisseria polysaccharea strain M18661]
ATGTTTTATCTGTATCAATCCAACCGTCTTGAAACGCTGGCGGCACTGTTTGCCCACATTCAAAAATTCAAACCGCTGAA
ATCGGTTTTACAGCCCGAACAGATTATTGTGCAGAGTCAGGGGATGCGCCGCTACCTCAACACCTGCCTCGCCCGCGATT
TGGGCGTGGCGGCGAATTTGGCGTTCAGCCTGCCCGCCGGCCTGACGTGGAAGCTGATGAAAAAACTGATTCCCGGTATT
CCGGAACTCAGCCCGTTTGCCCCCGAAGTCATGCGCTGGCGGCTGTTGGATTTGTTCCGCAGCGCAGAGTTTCAAAACGG
AGCGGAGTTTGAAGACGTAAGGCGTGTGCTGCAAAACTATTTGGGCAGCGGCGAATCGGCAGATTATCAGCTTGCGGGAC
AGCTTGCGGACATATTCGACCAATACCTTGTCTATCGTCCGCAGTGGATAGACGCTTGGCAGCAGGGCAGGATACTCGGT
TTGGGCGACGACGAAATCTGGCAGTCTAAACTGTGGCGCTATCTCGATGACGGCAGGCAGAGCGCGCCGCACCGTGTCGC
GTTGTGGGAAAAACTGCTTGCCGCGTTGGACAAGGATAAGCTGCCCGAGCGTTATTTCGTGTTCGGCATTTCCACGATGG
CGCCGATGTATTTGCAACTTTTGCACAAGCTGTCCGAACATTGCGACGTGTTCGTGTTCGCACTCAATCCGAGCGGGATG
CATTGGGGCAATGTCATCGAGGCGGCGCAAATCCTCAAAGGTGGCGGCGATCCCGATTTAACTCAGACAGGGCATCCGCT
GCTCGCCTCATTGGGCAAGCAGGGGCGGGACTTTTTCGACTTTTTGAACGAAATGGAAATAGAAGAAGAAACGCCGGTAT
TTGAAGAAGGCGGGCGCGATACGCTTTTGCACGCCCTGCAAACCGATATTCAAAACCTGAAAATGCCGTCTGAAACGGCG
GGAAGCGTCAACACGGGCGACGGCTCGATACGCATCGTATCGGCACACAGCCCTTTGCGCGAATTGCAGATACTCAAAGA
CAAACTGTTGAAAATTCTGCATGAACATCCCGATTGGCAGCCGCACTACATCGCCGTATTAACCCCGAATATCGAATCCT
ATACGCCTTTTATCGAAGCCGTGTTCGGACAGGCGCAGCCCGGTGCGCAGGCATTGCCGTATTCCGTGTCAGACGTGAAA
ATCAGCCGCCGACAACCGCTGTTTCATGCTTTGTCATGCCTGTTCGACTTGTTGGAAAGCCGATTTGAAGTCGACAAAGT
GCTTGTGCTTTTAGAAACCGCGCCCGTGTTGCGCCGTTTCGGACTGACTGAGGACGATTTACCGCTTTTGCACGACATGG
TTGCCGATTTGAACGTTCACTGGGGTTTGGACGGAGAAATGCGCGGCGGCACGGATCAGCTGTTCACCTGGAAGCAGGCG
GTAGAACGCATGATATTGGGCTGGATGCTGCCCGAAGGCGGCAATCCGATGTGGCAGGATGTCAGTGCGTGGTATGCCGA
CGTGAATCAAACCGTCATGTTTGGACGTTTTGCCGCCTTTATCGAGTCCCTGACGGATATTGTACGGATATGGCGGCAAC
CTGCGACGGTCGGCGAATGGGTGGCGCGTTGCCGGGATTTGCTTGAAATATTGTTCCAAACCGGGGCCGATGACCAAAAG
GCAGTCCAAAACCTCGAAAACGAATGGGTCAAATGGCAGGAAGAGAGTACTCTGGCTGGGTTCATCGGACAGTTGCCGCA
ACAAACCGTCATCCGCCACATCCGCCGCTTCCTCGACAGCGAAAGTGAGGCAGGCTTTTTACGCGGCGGCATCACTTTTT
GCAGTATGGTGCCGATGCGCAGCCTGCCGTTCAAAGTCATCTGCCTGTTGGGTTTGAACGACGGAGATTTTCCCCGCAAT
ACCAAAGCCGCCGTATTCGACCTGATTGCCAAACATCCCGCCAAAGGCGACCGAGCCCGTCGCGATGACGACCGCTACCT
GTTCCTTGAAGCTCTCATCAGCGCGCGCGAAATCCTGTATTTGTCCTACATCGGGCGCGACATCCGCAAAGACGAAGAGC
TTGCCCCGTCTTCGCTGTTGGGCGAACTCATCGATACCGTTGCCGCCATGACCGGCACAAACAGCCGCCAACTTGCACAA
AATTGGATAGAACAGCATCCGCTGCAAGCCTTCTCGCGCCGATATTTCCAAGAAGGCGGACGTTCAGACGGCATATTCGG
CACGCGTACCGACTACGCCGCCGCGCTCGGACAAACGCCCGAACCGCCACAACCCTTTTTCGACCAATCCGTAGAAAACG
CCGAACCTGTTGCCGAAATCGGACAGGACGAATTTATCCGCTTCTGGCGCAACCCCGTCAAAGTATGGCTTCAGCAGCAG
CTTGCGTGGAGTGAACCCCATATCGGCGAAGCCTGGGAGCCTGCCGAACCCTTCGAGCCGCAACACGCCGATCAAATCGC
CGAAACCTACATCGAAGCACGGCGCGAAGGACGGGATTTTGCCCAAACCGCCGCCCGCATCGTTGCGGAAAGCCTGCTGC
CGTCGGGAGAGTTGGGCAGACTTTGGCAGCAGGACTTCCAAACCGCCGCCAAACAAATCGACACGGCGGTTTTAAACAGC
CCAAAACTGCCACCGCTTTCATACGCCATACCGTCGGACGGGCAAATCCTGAAAGGCAGTTTGAGCAATTTATACCAATG
CGGACAAGTGTTTTACGCCTATGGCAAACCCAATGCGCCGCAACGTGTGGCTTTTCTTCTGGAACACCTGATATTTTGCG
CCGTTATGCCGTCTGAAGCCGAAACGCGGCAAACCTTTATCGTCCAATCCGGAGAAACCGAAATATTGGCGGAAATCGCG
CAAGACAGGGCATTGCAGCTATTGTCGGAATGGATGGCGTTTTTCAATATCGGGCAAAACCGCCCGCTGCCGTTTTTTGC
CAAAACCTCGCTTGCCGCCGCCGAAGCGTTTGCCCAAAAACAAGATTGGGAAGCCGCCCTGAAAAAAGCCCAAACCGCCT
ACCACGGCAACAAAGTCAGCAAAGGGCAGAAAGACTACACCGAAGTCGCCCTCGTGTTCGGCAACGCAAGCCAAAACCCG
CTCGAACAGCCCCTGTTTGAAAATCTCGTCCGCCTGCTTGCCGACACGCTTGCCGCAGCGGAAAAAAAGGAAGAGACCGG
AGAAGCATAA
ATGTTTTATCTGTATCAATCCAACCGTCTTGAAACGCTGGCGGCACTGTTTGCCCACATTCAAAAATTCAAACCGCTGAA
ATCGGTTTTACAGCCCGAACAGATTATTGTGCAGAGTCAGGGGATGCGCCGCTACCTCAACACCTGCCTCGCCCGCGATT
TGGGCGTGGCGGCGAATTTGGCGTTCAGCCTGCCCGCCGGCCTGACGTGGAAGCTGATGAAAAAACTGATTCCCGGTATT
CCGGAACTCAGCCCGTTTGCCCCCGAAGTCATGCGCTGGCGGCTGTTGGATTTGTTCCGCAGCGCAGAGTTTCAAAACGG
AGCGGAGTTTGAAGACGTAAGGCGTGTGCTGCAAAACTATTTGGGCAGCGGCGAATCGGCAGATTATCAGCTTGCGGGAC
AGCTTGCGGACATATTCGACCAATACCTTGTCTATCGTCCGCAGTGGATAGACGCTTGGCAGCAGGGCAGGATACTCGGT
TTGGGCGACGACGAAATCTGGCAGTCTAAACTGTGGCGCTATCTCGATGACGGCAGGCAGAGCGCGCCGCACCGTGTCGC
GTTGTGGGAAAAACTGCTTGCCGCGTTGGACAAGGATAAGCTGCCCGAGCGTTATTTCGTGTTCGGCATTTCCACGATGG
CGCCGATGTATTTGCAACTTTTGCACAAGCTGTCCGAACATTGCGACGTGTTCGTGTTCGCACTCAATCCGAGCGGGATG
CATTGGGGCAATGTCATCGAGGCGGCGCAAATCCTCAAAGGTGGCGGCGATCCCGATTTAACTCAGACAGGGCATCCGCT
GCTCGCCTCATTGGGCAAGCAGGGGCGGGACTTTTTCGACTTTTTGAACGAAATGGAAATAGAAGAAGAAACGCCGGTAT
TTGAAGAAGGCGGGCGCGATACGCTTTTGCACGCCCTGCAAACCGATATTCAAAACCTGAAAATGCCGTCTGAAACGGCG
GGAAGCGTCAACACGGGCGACGGCTCGATACGCATCGTATCGGCACACAGCCCTTTGCGCGAATTGCAGATACTCAAAGA
CAAACTGTTGAAAATTCTGCATGAACATCCCGATTGGCAGCCGCACTACATCGCCGTATTAACCCCGAATATCGAATCCT
ATACGCCTTTTATCGAAGCCGTGTTCGGACAGGCGCAGCCCGGTGCGCAGGCATTGCCGTATTCCGTGTCAGACGTGAAA
ATCAGCCGCCGACAACCGCTGTTTCATGCTTTGTCATGCCTGTTCGACTTGTTGGAAAGCCGATTTGAAGTCGACAAAGT
GCTTGTGCTTTTAGAAACCGCGCCCGTGTTGCGCCGTTTCGGACTGACTGAGGACGATTTACCGCTTTTGCACGACATGG
TTGCCGATTTGAACGTTCACTGGGGTTTGGACGGAGAAATGCGCGGCGGCACGGATCAGCTGTTCACCTGGAAGCAGGCG
GTAGAACGCATGATATTGGGCTGGATGCTGCCCGAAGGCGGCAATCCGATGTGGCAGGATGTCAGTGCGTGGTATGCCGA
CGTGAATCAAACCGTCATGTTTGGACGTTTTGCCGCCTTTATCGAGTCCCTGACGGATATTGTACGGATATGGCGGCAAC
CTGCGACGGTCGGCGAATGGGTGGCGCGTTGCCGGGATTTGCTTGAAATATTGTTCCAAACCGGGGCCGATGACCAAAAG
GCAGTCCAAAACCTCGAAAACGAATGGGTCAAATGGCAGGAAGAGAGTACTCTGGCTGGGTTCATCGGACAGTTGCCGCA
ACAAACCGTCATCCGCCACATCCGCCGCTTCCTCGACAGCGAAAGTGAGGCAGGCTTTTTACGCGGCGGCATCACTTTTT
GCAGTATGGTGCCGATGCGCAGCCTGCCGTTCAAAGTCATCTGCCTGTTGGGTTTGAACGACGGAGATTTTCCCCGCAAT
ACCAAAGCCGCCGTATTCGACCTGATTGCCAAACATCCCGCCAAAGGCGACCGAGCCCGTCGCGATGACGACCGCTACCT
GTTCCTTGAAGCTCTCATCAGCGCGCGCGAAATCCTGTATTTGTCCTACATCGGGCGCGACATCCGCAAAGACGAAGAGC
TTGCCCCGTCTTCGCTGTTGGGCGAACTCATCGATACCGTTGCCGCCATGACCGGCACAAACAGCCGCCAACTTGCACAA
AATTGGATAGAACAGCATCCGCTGCAAGCCTTCTCGCGCCGATATTTCCAAGAAGGCGGACGTTCAGACGGCATATTCGG
CACGCGTACCGACTACGCCGCCGCGCTCGGACAAACGCCCGAACCGCCACAACCCTTTTTCGACCAATCCGTAGAAAACG
CCGAACCTGTTGCCGAAATCGGACAGGACGAATTTATCCGCTTCTGGCGCAACCCCGTCAAAGTATGGCTTCAGCAGCAG
CTTGCGTGGAGTGAACCCCATATCGGCGAAGCCTGGGAGCCTGCCGAACCCTTCGAGCCGCAACACGCCGATCAAATCGC
CGAAACCTACATCGAAGCACGGCGCGAAGGACGGGATTTTGCCCAAACCGCCGCCCGCATCGTTGCGGAAAGCCTGCTGC
CGTCGGGAGAGTTGGGCAGACTTTGGCAGCAGGACTTCCAAACCGCCGCCAAACAAATCGACACGGCGGTTTTAAACAGC
CCAAAACTGCCACCGCTTTCATACGCCATACCGTCGGACGGGCAAATCCTGAAAGGCAGTTTGAGCAATTTATACCAATG
CGGACAAGTGTTTTACGCCTATGGCAAACCCAATGCGCCGCAACGTGTGGCTTTTCTTCTGGAACACCTGATATTTTGCG
CCGTTATGCCGTCTGAAGCCGAAACGCGGCAAACCTTTATCGTCCAATCCGGAGAAACCGAAATATTGGCGGAAATCGCG
CAAGACAGGGCATTGCAGCTATTGTCGGAATGGATGGCGTTTTTCAATATCGGGCAAAACCGCCCGCTGCCGTTTTTTGC
CAAAACCTCGCTTGCCGCCGCCGAAGCGTTTGCCCAAAAACAAGATTGGGAAGCCGCCCTGAAAAAAGCCCAAACCGCCT
ACCACGGCAACAAAGTCAGCAAAGGGCAGAAAGACTACACCGAAGTCGCCCTCGTGTTCGGCAACGCAAGCCAAAACCCG
CTCGAACAGCCCCTGTTTGAAAATCTCGTCCGCCTGCTTGCCGACACGCTTGCCGCAGCGGAAAAAAAGGAAGAGACCGG
AGAAGCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recC | Neisseria gonorrhoeae strain FA1090 |
94.668 |
100 |
0.947 |