Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   DV115_RS01840 Genome accession   NZ_CP031325
Coordinates   354904..355365 (+) Length   153 a.a.
NCBI ID   WP_003751359.1    Uniprot ID   -
Organism   Neisseria polysaccharea strain M18661     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 349904..360365
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV115_RS01810 - 350615..351829 (-) 1215 WP_003751370.1 pyridoxal phosphate-dependent aminotransferase -
  DV115_RS01815 - 351918..352127 (-) 210 WP_003674694.1 tautomerase family protein -
  DV115_RS01820 - 352235..352447 (+) 213 Protein_322 hypothetical protein -
  DV115_RS01825 - 352478..353743 (-) 1266 WP_003751365.1 Glu/Leu/Phe/Val family dehydrogenase -
  DV115_RS01835 - 354140..354847 (+) 708 WP_115437524.1 phosphoglycolate phosphatase -
  DV115_RS01840 recX 354904..355365 (+) 462 WP_003751359.1 recombination regulator RecX Regulator
  DV115_RS11750 - 355439..355600 (+) 162 WP_025456733.1 hypothetical protein -
  DV115_RS01855 - 355753..356235 (+) 483 WP_003710586.1 acyl-CoA thioesterase -
  DV115_RS01860 - 356634..357650 (-) 1017 WP_003751357.1 peptidoglycan DD-metalloendopeptidase family protein -
  DV115_RS01865 surE 357753..358499 (-) 747 WP_003751355.1 5'/3'-nucleotidase SurE -
  DV115_RS01870 - 358513..360069 (-) 1557 WP_003751354.1 TerC family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17782.13 Da        Isoelectric Point: 10.2566

>NTDB_id=305634 DV115_RS01840 WP_003751359.1 354904..355365(+) (recX) [Neisseria polysaccharea strain M18661]
MKPQKSLRARAMDILSRQEVSRLGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEETSRKLLPDRSSEKQAAIAVLRKKFKQPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGY

Nucleotide


Download         Length: 462 bp        

>NTDB_id=305634 DV115_RS01840 WP_003751359.1 354904..355365(+) (recX) [Neisseria polysaccharea strain M18661]
ATGAAACCCCAAAAATCACTCCGCGCCCGCGCAATGGACATCCTCTCACGCCAAGAAGTCAGCCGCCTCGGTCTGAAGCG
CAAACTTGCACCGCACGCCGAAAGCGAAGAGGAGTTGGAAAATGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTACGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGCTCCCTGCGCCTGAAACAAGCCTTGGCTCAA
CAGGGCATAGATGAAGAAACCAGCCGCAAGCTGCTTCCCGACCGCTCAAGCGAAAAACAGGCCGCCATAGCCGTGTTGCG
TAAAAAGTTCAAACAGCCCGCCGCCGACCTTAAAGAAAAACAAAAACAGGCACGTTTCCTCGCCTATCGCGGATTCGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACGGCTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

96.053

99.346

0.954

Multiple sequence alignment