Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   DV175_RS12040 Genome accession   NZ_CP031324
Coordinates   2054277..2054738 (+) Length   153 a.a.
NCBI ID   WP_002216872.1    Uniprot ID   A0A2J1SH93
Organism   Neisseria meningitidis strain M23347     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 2049277..2059738
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV175_RS12015 - 2050404..2050613 (-) 210 WP_002212949.1 4-oxalocrotonate tautomerase family protein -
  DV175_RS12020 - 2050958..2051764 (+) 807 WP_002212946.1 DUF4198 domain-containing protein -
  DV175_RS12025 - 2051822..2053087 (-) 1266 WP_002238112.1 Glu/Leu/Phe/Val dehydrogenase -
  DV175_RS12035 - 2053494..2054204 (+) 711 WP_002226230.1 phosphoglycolate phosphatase -
  DV175_RS12040 recX 2054277..2054738 (+) 462 WP_002216872.1 recombination regulator RecX Regulator
  DV175_RS14220 - 2054812..2054973 (+) 162 WP_002238113.1 hypothetical protein -
  DV175_RS12055 - 2055126..2055608 (+) 483 WP_002216871.1 acyl-CoA thioesterase -
  DV175_RS12060 - 2055969..2057192 (-) 1224 WP_002238114.1 peptidoglycan DD-metalloendopeptidase family protein -
  DV175_RS12065 surE 2057448..2058194 (-) 747 WP_002238115.1 5'/3'-nucleotidase SurE -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17717.03 Da        Isoelectric Point: 10.0960

>NTDB_id=305626 DV175_RS12040 WP_002216872.1 2054277..2054738(+) (recX) [Neisseria meningitidis strain M23347]
MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEETSRNLLPDRSSEKQAAIAVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=305626 DV175_RS12040 WP_002216872.1 2054277..2054738(+) (recX) [Neisseria meningitidis strain M23347]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAAGTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAGGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTATGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAGAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAGCGAAAAACAGGCCGCCATAGCCGTGTTGCG
TAAAAAATTCAAACACCCCGCCGCCGACCTCAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGATTCGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACGGCTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2J1SH93

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

98.039

100

0.98

Multiple sequence alignment