Detailed information    

insolico Bioinformatically predicted

Overview

Name   tpc   Type   Machinery gene
Locus tag   DV175_RS07530 Genome accession   NZ_CP031324
Coordinates   1271237..1272235 (-) Length   332 a.a.
NCBI ID   WP_002237643.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M23347     
Function   DNA processing; DNA transport into the cytoplasm (predicted from homology)   
DNA processing DNA binding and uptake

Genomic Context

Location: 1266237..1277235
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV175_RS07510 - 1267719..1268345 (-) 627 WP_002237647.1 phosphoribosylanthranilate isomerase -
  DV175_RS07515 greB 1268404..1268895 (-) 492 WP_002237646.1 transcription elongation factor GreB -
  DV175_RS07520 purF 1268995..1270539 (-) 1545 WP_002237645.1 amidophosphoribosyltransferase -
  DV175_RS07525 - 1270747..1271244 (-) 498 WP_002237644.1 CvpA family protein -
  DV175_RS07530 tpc 1271237..1272235 (-) 999 WP_002237643.1 cell division protein FtsN Machinery gene
  DV175_RS07535 folC 1272248..1273522 (-) 1275 WP_002237642.1 bifunctional tetrahydrofolate synthase/dihydrofolate synthase -
  DV175_RS07540 - 1273554..1274000 (-) 447 WP_002222775.1 protein YgfX -
  DV175_RS07545 - 1274005..1274364 (-) 360 WP_002233690.1 hypothetical protein -
  DV175_RS07550 - 1274437..1275165 (-) 729 WP_002233691.1 amino acid ABC transporter ATP-binding protein -
  DV175_RS07555 rsmA 1275338..1276117 (-) 780 WP_002237641.1 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA -
  DV175_RS07565 - 1276329..1277018 (+) 690 WP_002237640.1 DNA glycosylase -

Sequence

Protein


Download         Length: 332 a.a.        Molecular weight: 35519.95 Da        Isoelectric Point: 10.2574

>NTDB_id=305608 DV175_RS07530 WP_002237643.1 1271237..1272235(-) (tpc) [Neisseria meningitidis strain M23347]
MSKNKQNEVLSGYEQLKRRNRRRLVTASCLVAASCILLAAALSSGPAEQTAGETSGVENKAAGAAQTPALKSAADKPQDL
AGEDKPSAADSEISEPENVGAPLVLINDRLEDSNIKGLEASEKLQQAETAKTAPKQAKQRAAEKVPATADSTDTVAVEKP
KRTAETKPQKAERTAKAKPKAKETKTAEKVADKPKTAAEKTKPDTAKSDSAVKEAKKADKAESKKTAEKDRSDGKKHETA
QKTDKADKTKTAEKEKSGKKAAIQAGYAEKERALSLQRKMKAAGIDSTITEIMTDNGKVYRVKSSNYKNARDAERDLNKL
RVHGIAGQVTNE

Nucleotide


Download         Length: 999 bp        

>NTDB_id=305608 DV175_RS07530 WP_002237643.1 1271237..1272235(-) (tpc) [Neisseria meningitidis strain M23347]
ATGTCCAAAAACAAACAAAACGAAGTCCTGAGCGGTTACGAACAACTCAAACGGCGCAACCGCCGCCGCCTCGTAACGGC
AAGTTGCCTGGTTGCCGCCTCCTGCATCCTGCTGGCAGCCGCCCTCAGTTCCGGCCCTGCCGAACAGACTGCCGGCGAAA
CAAGCGGCGTAGAAAACAAAGCGGCAGGTGCGGCACAAACCCCTGCCTTGAAATCTGCCGCCGACAAACCGCAGGACTTG
GCAGGCGAAGACAAGCCTTCTGCCGCCGACAGCGAAATCAGCGAGCCTGAAAACGTAGGCGCGCCGCTGGTGCTGATTAA
CGACCGCCTCGAAGACAGCAACATCAAAGGTTTGGAAGCATCCGAGAAACTGCAACAGGCAGAAACCGCCAAAACCGCAC
CGAAGCAGGCAAAACAACGCGCTGCCGAAAAAGTGCCGGCAACTGCCGACAGTACGGATACGGTAGCGGTTGAAAAACCG
AAACGCACTGCCGAAACAAAACCGCAAAAAGCGGAACGCACTGCCAAAGCCAAGCCCAAAGCCAAAGAAACCAAAACCGC
CGAAAAAGTTGCCGACAAACCGAAAACTGCCGCCGAAAAAACCAAACCGGATACGGCAAAATCCGACAGCGCGGTAAAAG
AAGCGAAAAAAGCCGACAAGGCTGAAAGCAAAAAAACAGCCGAAAAAGACCGTTCGGACGGCAAAAAACACGAAACGGCA
CAAAAAACCGACAAAGCGGACAAGACCAAAACCGCCGAGAAGGAAAAATCCGGTAAAAAAGCCGCCATTCAGGCAGGTTA
TGCCGAAAAAGAACGCGCCTTAAGCCTCCAGCGCAAAATGAAGGCGGCGGGTATCGATTCGACCATCACCGAAATTATGA
CCGACAACGGCAAAGTTTACCGCGTCAAATCAAGCAACTATAAAAACGCAAGGGATGCCGAACGCGATTTGAACAAATTG
CGCGTACACGGTATCGCCGGTCAGGTAACGAATGAATAA

Domains

Predicted by InterproScan.

SPOR domain (SPOR)

(259-330)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tpc Neisseria gonorrhoeae MS11

89.595

100

0.934

Multiple sequence alignment