Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   DV175_RS06250 Genome accession   NZ_CP031324
Coordinates   1063619..1065661 (+) Length   680 a.a.
NCBI ID   WP_002238302.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M23347     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1058619..1070661
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV175_RS06225 - 1059650..1059781 (+) 132 WP_002214465.1 response regulator transcription factor -
  DV175_RS06230 - 1059820..1061070 (+) 1251 WP_002238301.1 ATP-binding protein -
  DV175_RS06235 rng 1061105..1062598 (-) 1494 WP_002214463.1 ribonuclease G -
  DV175_RS06240 grxC 1062812..1063069 (+) 258 WP_002221441.1 glutaredoxin 3 -
  DV175_RS06245 secB 1063090..1063533 (+) 444 WP_002226664.1 protein-export chaperone SecB -
  DV175_RS06250 recG 1063619..1065661 (+) 2043 WP_002238302.1 ATP-dependent DNA helicase RecG Machinery gene
  DV175_RS06265 argC 1066736..1067779 (-) 1044 WP_002238303.1 N-acetyl-gamma-glutamyl-phosphate reductase -
  DV175_RS06270 - 1067776..1068057 (-) 282 WP_002219774.1 hypothetical protein -
  DV175_RS06285 - 1068425..1069573 (+) 1149 Protein_1015 cupin domain-containing protein -
  DV175_RS06290 - 1069582..1069788 (+) 207 WP_002238305.1 hypothetical protein -
  DV175_RS06300 - 1069993..1070253 (+) 261 WP_025462690.1 hypothetical protein -

Sequence

Protein


Download         Length: 680 a.a.        Molecular weight: 74882.00 Da        Isoelectric Point: 8.0873

>NTDB_id=305606 DV175_RS06250 WP_002238302.1 1063619..1065661(+) (recG) [Neisseria meningitidis strain M23347]
MMSPETRKQLKITDVSAKKLEKLNLHTAWDLVLHLPLRYEDETHIMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQI
ADGSGSVLFLRFIHFYASHQKQTAIGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
QTALDVTPLHDTLPDALLCRLKLPHLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKFDELLAQQLSMRLARQKRIGGTA
AALGGDGTLTQALRQALPFALTDAQEKVVSEICRDMAQTYPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEI
LAEQHFIKFKQWLEPLGIEVVRLFGSLRKKAKDEAKAKLADGSVKIAVGTHALFSDGVAFHNLGLTIVDEQHRFGVAQRL
ALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRLVNNVRRAEVEGFVLGTCRKGRQAYWVCPLI
EESETLQLQTAAETLARLQTALPELNIGLVHGRMKAAEKAEVMARFSSGGLNVLVATTVIEVGVDVPNAALMVIEHAERM
GLAQLHQLRGRVGRGAAESVCVLLFAEPLGELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFAKLEE
DLHLLEQAREIAPILIEQNPEIVEAHLARWLSGREGYLGV

Nucleotide


Download         Length: 2043 bp        

>NTDB_id=305606 DV175_RS06250 WP_002238302.1 1063619..1065661(+) (recG) [Neisseria meningitidis strain M23347]
ATGATGTCGCCCGAAACCCGAAAACAGCTCAAAATCACCGATGTTTCCGCCAAGAAGCTCGAAAAACTCAACCTCCATAC
CGCATGGGATTTGGTGTTGCACCTGCCGTTGCGTTACGAGGATGAGACGCACATCATGCCGATTAAGGATGCGCCGATCG
GCGTGCCGTGTCAGGTCGAGGGCGAAGTCATCCATCAGGAAGTAACGTTCAAACCGCGCAAGCAGCTGATTGTCCAAATC
GCCGACGGCTCCGGCAGCGTCCTTTTCCTGCGCTTCATCCACTTTTACGCCAGCCATCAGAAGCAGACGGCGATCGGCAA
ACGCATCCGCGCCGTGGGCGAAATCAAACACGGCTTTTACGGCGACGAGATGATTCATCCCAAAATCCGCGATGCCGAGG
GCGGCGGTTTGGCGGAAAGCCTCACGCCGGTTTACCCGACCGTAAACGGTTTGAACCAGCCCACTTTGCGCCGTATTATT
CAGACGGCGTTGGACGTTACGCCGCTGCACGACACGCTGCCCGATGCCCTGCTGTGCCGTCTGAAGCTGCCACACCTCGC
CGAAAGCCTGCGTCTTTTGCATTCGCCGCCGCCGAGTTTCACGATTCATCAGCTTTCAGACGGCACGCTGCCTGCATGGC
AACGGCTCAAATTCGATGAACTTTTGGCGCAACAGCTTTCGATGCGCTTGGCGCGACAGAAGCGTATCGGCGGCACGGCG
GCGGCATTGGGCGGCGACGGCACATTGACCCAAGCCCTGCGCCAAGCCCTGCCGTTTGCCCTGACCGATGCGCAAGAAAA
AGTTGTTTCCGAAATCTGCCGCGATATGGCGCAAACCTACCCGATGCACCGCCTGCTGCAGGGCGATGTCGGCAGCGGCA
AAACCATTGTGGCTGCTTTGTCTGCTTTGACGGCTATCGAATCCGGTGCGCAGGTGGCTGTAATGGCGCCCACTGAAATC
CTTGCCGAACAGCATTTTATTAAATTTAAACAATGGCTCGAACCTTTGGGCATTGAAGTTGTCCGCCTTTTTGGCAGTTT
GCGTAAAAAAGCCAAAGACGAAGCCAAAGCCAAACTGGCTGACGGCAGCGTCAAAATCGCCGTCGGCACGCACGCCCTGT
TTTCAGACGGCGTGGCGTTTCACAATTTGGGCTTGACCATTGTGGACGAACAGCACCGTTTCGGCGTTGCCCAACGCCTC
GCCCTCAAAAACAAAGGGCGCGAAGTCCATCAGCTGATGATGTCCGCCACGCCCATCCCGCGCACGCTTGCGATGAGTTT
TTTCGCCGATTTGGACGTGTCCGTCATCGACGAATTGCCGCCCGGGCGCACACCGATTAAAACGCGCCTCGTCAACAACG
TCCGCCGCGCCGAAGTCGAAGGCTTCGTCCTCGGCACTTGCCGAAAAGGGCGGCAGGCGTATTGGGTCTGCCCATTGATT
GAAGAAAGCGAAACCCTGCAACTGCAAACCGCCGCCGAAACCCTCGCCCGGCTTCAGACGGCATTGCCCGAACTCAATAT
CGGACTGGTACACGGGCGCATGAAGGCCGCCGAAAAGGCCGAAGTGATGGCGCGGTTTTCTTCGGGGGGGCTGAACGTCT
TGGTCGCCACCACCGTCATCGAAGTCGGCGTAGATGTGCCCAATGCCGCCCTGATGGTCATCGAACACGCCGAGCGCATG
GGCTTGGCGCAGCTGCACCAATTACGCGGTCGGGTCGGGCGCGGCGCGGCAGAAAGCGTGTGCGTCCTCCTGTTTGCCGA
ACCCTTGGGCGAACTCGCCAAAGCGCGGTTGAAAGTCATCTACGAACACACCGACGGCTTTGAAATCGCCCGCCAAGACC
TCAACATCCGCGGCCCCGGCGAATTTCTCGGCGCGCGTCAAAGCGGCGTGCCTATGCTGCGTTTCGCCAAGCTCGAAGAA
GACTTACACCTTTTGGAACAAGCGCGCGAAATCGCCCCGATACTGATTGAGCAAAACCCCGAAATCGTCGAAGCGCATTT
GGCAAGGTGGCTTTCCGGCAGGGAAGGGTATTTGGGCGTGTGA

Domains

Predicted by InterproScan.

DEAD/DEAH box helicase (DEAD)

(262-421)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(604-666)

Helicase conserved C-terminal domain (Helicase_C)

(468-575)

RecG wedge domain (RecG_wedge)

(15-164)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

99.412

100

0.994

Multiple sequence alignment