Detailed information NTG0305038

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: DV311_RS00810
• Genome accession: NZ_CP031253
• Coordinates: 134410..137436 (-)
• Length: 1008 a.a.
• NCBI ID: WP_114934961.1
• Uniprot ID: -
• Organism: Neisseria lactamica strain M17106
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 129410..142436

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DV311_RS00765	-	129610..130248 (-)	639	WP_096108125.1	DUF6037 family protein	-
DV311_RS00770	-	130985..131380 (-)	396	WP_114934956.1	endonuclease domain-containing protein	-
DV311_RS00775	-	131521..131778 (-)	258	WP_114934957.1	SemiSWEET family transporter	-
DV311_RS00780	carA	131896..133029 (-)	1134	WP_114934958.1	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	-
DV311_RS00810	pilC	134410..137436 (-)	3027	WP_114934961.1	PilC family type IV pilus tip adhesin	Machinery gene
DV311_RS00845	apbC	139429..140508 (-)	1080	WP_114936029.1	iron-sulfur cluster carrier protein ApbC	-
DV311_RS00855	-	140873..141382 (+)	510	WP_096108114.1	protein disulfide oxidoreductase	-
DV311_RS00860	hpaR	141691..142131 (+)	441	WP_003714529.1	homoprotocatechuate degradation operon regulator HpaR	-

Sequence

Protein

• Length: 1008 a.a.
• Molecular weight: 108142.51 Da
• Isoelectric Point: 9.1487

>NTDB_id=305038 DV311_RS00810 WP_114934961.1 134410..137436(-) (pilC) [Neisseria lactamica strain M17106]
MPSGHRENKRKENDMKKTPKRHLLRHTAVYTAMILAVSSQQAFGAGDSETFNFIVKDDGSVEGGKIPGGQGVRNGRKLSI
PKGRPGSVSTQQACTDLGITPRTPECNFIVSLTDEFTYANTDTLLAGKGGKLNLGGGPAPLWGKVSGLDADNMAGRKTDS
WLTTVHKGKMGYDFTGISCFLKGVGVSTGQSRQCPDLPFKFYFNFKDSALDPASAGTSPDGLPIYKLKDHPWLGVSFQLT
KSSGTAPQWITINNDHTLLNEMITQPTGERSSGRAFALRAKLHLLGTPGSLNAQEIKLGEINMPDFNFMPYNANGRGRTG
TLYKIHEQGHIDVKLQLPSIGAGGCTRAQYTATAPDGGQYAIVAPAPLGAGFPGKAAAVVTDPKSASSRILFYTLDKNNK
KNGGADYLPSKGFTEPVFTGRKAAIRLANGVSLSDSNINGITNGTFGIGSLGNNQDEWKTVLLRWTDRRDANDNQFNYFN
NAIDASTRGKLYSQQYRIRDDKNRNLGDIVNSPVTAVGDYLATAANDGMVHIFKKSGGGYNLKLSYIPGTMPRKNLDNQD
SDLAKDLHNFANENYTGGLYGVDGGFVLRQVGNRVFMFGAMGQGGKGAYALDLTKAESNQTGVSLFDVQGNGLGYTVGTP
QIGKTHNDKYAAFLASGYAVKDINSPENQTALYVYDLESNGTLIKKIAVPGGKGGLSSPTLVDTDLDGTVDIAYAGDRGG
NMYRFDLGGNDPTRWSARAIFQGTKPITSAPAISQLKDKRVVIFGTGSDLTEDDVASQEIQHVYGIFDNDTDSLPAEDGL
GKGLLEQVVTKDGNMLFLSDYKRSDGSGDKGWVVKLQPGQRVTVKPTVVLRTAFVTIRNYNANGCGAETAFLGINTADGG
KLTKKSARPVVPDNRVAKKVGEKKDAKGNNIPVGCMEKGTETVCPSGYIYPKLLTASYLDSQKTNDHPTTADGDAGGSGN
DNTPFQKSGNRCFFSKGVHTLLMNDMSDLDVTGPICNMKRVSWREVFF

Nucleotide

• Length: 3027 bp

>NTDB_id=305038 DV311_RS00810 WP_114934961.1 134410..137436(-) (pilC) [Neisseria lactamica strain M17106]
ATGCCGTCCGGCCATCGGGAAAACAAACGGAAGGAAAACGATATGAAAAAAACACCCAAACGGCACTTGCTCCGCCATAC
CGCGGTTTATACCGCGATGATTTTGGCGGTATCGTCCCAACAGGCGTTCGGCGCGGGCGATAGTGAAACTTTCAACTTTA
TCGTCAAAGACGACGGCAGCGTAGAAGGCGGTAAGATACCCGGCGGTCAGGGCGTACGCAACGGTCGGAAATTGTCTATT
CCGAAAGGTCGACCCGGTTCGGTAAGCACACAACAAGCGTGTACTGATCTAGGAATCACACCCAGAACTCCAGAATGTAA
TTTTATCGTGTCGCTGACTGACGAATTTACCTACGCAAACACCGACACGCTGCTTGCGGGCAAGGGCGGCAAGCTGAACC
TCGGCGGCGGTCCCGCCCCGCTGTGGGGCAAAGTTTCCGGGCTTGATGCCGACAATATGGCGGGGCGCAAAACCGACAGT
TGGCTGACGACCGTCCATAAAGGGAAGATGGGTTACGATTTTACCGGCATCAGCTGCTTCCTCAAGGGCGTGGGTGTCTC
GACGGGTCAGAGCCGCCAGTGTCCCGACCTGCCTTTCAAATTTTATTTCAACTTTAAGGACAGCGCACTCGATCCCGCCT
CGGCGGGAACCAGTCCGGACGGCCTGCCGATATACAAGCTGAAAGACCATCCGTGGCTGGGCGTTTCCTTCCAATTGACT
AAATCGAGCGGCACTGCGCCGCAATGGATAACCATTAATAATGACCATACGCTGCTAAACGAAATGATTACCCAGCCGAC
AGGGGAAAGAAGCAGCGGCAGAGCCTTTGCCCTGCGCGCCAAGCTGCACCTGTTGGGTACTCCGGGCAGCCTCAACGCCC
AAGAAATCAAACTGGGCGAGATTAATATGCCCGACTTCAACTTTATGCCGTATAACGCAAACGGCAGGGGTCGGACGGGT
ACTCTGTATAAGATACATGAACAAGGCCATATCGACGTAAAACTCCAGCTTCCGAGCATAGGCGCGGGCGGCTGTACGCG
GGCGCAATATACCGCCACCGCCCCGGACGGCGGACAATACGCCATCGTCGCCCCCGCCCCTTTGGGCGCGGGTTTCCCGG
GCAAGGCGGCGGCGGTCGTTACCGATCCCAAGTCGGCAAGCAGCCGCATCCTCTTTTACACCTTGGATAAAAACAATAAG
AAAAACGGCGGCGCGGATTATCTGCCAAGCAAAGGGTTTACCGAACCCGTCTTTACCGGACGCAAGGCGGCAATCCGCCT
GGCAAACGGCGTATCCTTGAGCGACAGCAATATTAACGGCATTACGAATGGCACGTTCGGTATCGGCAGCTTGGGAAACA
ATCAAGACGAATGGAAAACCGTATTGCTGCGCTGGACCGACCGGCGCGATGCAAACGACAATCAGTTTAACTATTTTAAC
AATGCGATAGATGCTTCAACACGCGGCAAACTGTATAGCCAGCAATACCGCATCCGCGACGACAAGAATCGCAATTTGGG
CGACATCGTCAACAGCCCGGTAACGGCGGTCGGCGACTATCTGGCAACCGCCGCCAACGACGGGATGGTGCATATCTTCA
AAAAAAGCGGCGGCGGCTACAATCTGAAGCTCAGCTACATACCCGGCACGATGCCGCGCAAAAACTTGGATAACCAAGAT
TCCGATTTGGCAAAAGACCTGCACAATTTTGCCAACGAAAACTACACGGGCGGTTTGTACGGCGTGGACGGCGGCTTTGT
CTTGCGCCAAGTCGGAAACCGCGTGTTTATGTTCGGCGCGATGGGTCAGGGCGGCAAAGGCGCGTATGCCCTGGATTTGA
CCAAAGCCGAAAGCAACCAGACCGGCGTTTCCCTGTTTGATGTACAAGGCAACGGATTGGGCTACACCGTCGGCACACCG
CAAATCGGCAAAACCCACAACGACAAATACGCCGCCTTCCTCGCCTCCGGTTATGCCGTCAAAGATATTAACAGCCCGGA
AAATCAAACCGCGCTGTATGTATATGATTTGGAAAGCAACGGTACGCTGATTAAAAAAATTGCCGTACCCGGCGGCAAGG
GCGGGCTTTCGTCCCCCACGCTTGTCGATACGGATTTGGACGGCACGGTCGATATCGCCTATGCCGGCGATCGCGGCGGG
AATATGTACCGCTTTGATTTGGGCGGCAACGACCCGACCAGATGGTCTGCACGCGCCATTTTCCAAGGCACAAAACCGAT
TACTTCCGCGCCTGCTATTTCCCAACTGAAAGACAAACGCGTCGTCATCTTCGGCACAGGCAGCGATTTGACTGAGGATG
ATGTGGCAAGCCAAGAAATCCAACACGTTTACGGTATCTTTGATAACGATACGGACTCTTTGCCGGCAGAAGACGGATTG
GGCAAAGGGCTGCTTGAGCAAGTAGTGACAAAAGACGGCAATATGCTGTTCTTGAGCGACTACAAAAGGTCTGACGGCTC
GGGCGACAAGGGCTGGGTAGTGAAATTGCAGCCCGGACAGCGCGTTACCGTCAAACCGACCGTGGTATTGCGTACCGCCT
TTGTAACCATCCGCAACTACAATGCCAACGGCTGCGGCGCGGAAACGGCATTCTTGGGCATCAATACCGCCGACGGCGGC
AAGCTGACGAAGAAAAGCGCGCGCCCCGTCGTACCGGATAACCGCGTGGCAAAAAAAGTCGGCGAGAAAAAAGACGCAAA
AGGCAACAATATCCCCGTGGGCTGTATGGAAAAAGGCACTGAAACCGTCTGCCCGAGCGGATATATTTATCCGAAACTGC
TGACCGCAAGCTATTTGGACAGCCAAAAAACAAACGATCACCCGACAACGGCAGACGGCGACGCGGGCGGCAGCGGCAAT
GACAACACCCCCTTCCAAAAATCCGGCAACCGCTGCTTCTTCAGCAAAGGCGTGCACACGCTGCTGATGAACGATATGTC
CGACTTGGACGTTACCGGCCCGATCTGCAATATGAAACGGGTAAGCTGGCGCGAAGTCTTCTTCTAA

Domains

Predicted by InterproScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (518-820)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	50.139	100	0.538