Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   DV446_RS01195 Genome accession   NZ_CP031252
Coordinates   238061..238510 (+) Length   149 a.a.
NCBI ID   WP_074895939.1    Uniprot ID   A0A378TWL7
Organism   Neisseria elongata strain M15911     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 233061..243510
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV446_RS01175 cas2 233725..234018 (+) 294 WP_070540902.1 CRISPR-associated endonuclease Cas2 -
  DV446_RS01180 - 235976..236455 (+) 480 WP_070452740.1 S-ribosylhomocysteine lyase -
  DV446_RS01185 - 236475..237179 (+) 705 WP_074895934.1 5'-methylthioadenosine/adenosylhomocysteine nucleosidase -
  DV446_RS01190 - 237264..237980 (+) 717 WP_074895936.1 phosphoglycolate phosphatase -
  DV446_RS01195 recX 238061..238510 (+) 450 WP_074895939.1 recombination regulator RecX Regulator
  DV446_RS01200 - 238660..239481 (+) 822 WP_074895942.1 symmetrical bis(5'-nucleosyl)-tetraphosphatase -
  DV446_RS01205 - 239689..241224 (+) 1536 WP_074895945.1 sodium-dependent transporter -
  DV446_RS01210 - 241221..241331 (+) 111 WP_040665779.1 methionine/alanine import family NSS transporter small subunit -
  DV446_RS01220 hslO 241560..242456 (+) 897 WP_074895948.1 Hsp33 family molecular chaperone HslO -
  DV446_RS01225 - 242699..243019 (+) 321 WP_074895951.1 DUF485 domain-containing protein -

Sequence

Protein


Download         Length: 149 a.a.        Molecular weight: 17425.67 Da        Isoelectric Point: 9.6889

>NTDB_id=305007 DV446_RS01195 WP_074895939.1 238061..238510(+) (recX) [Neisseria elongata strain M15911]
MNPQKTLRARALDILSRQEISRAELKRKLAPHAENEEEIERVLDEFADRRWQSDERYAEAYIHSKSRKHGSLRLKQALAQ
KGVDEETVRAFLPDRDNELASAVEVVRKKFKRPPADYAEKLKQMRFLAYRGFDGDTIQTALRQAWTEGE

Nucleotide


Download         Length: 450 bp        

>NTDB_id=305007 DV446_RS01195 WP_074895939.1 238061..238510(+) (recX) [Neisseria elongata strain M15911]
ATGAACCCGCAGAAAACCCTCCGCGCCCGCGCACTCGACATCCTTTCACGTCAGGAAATCAGCCGTGCCGAACTCAAGCG
CAAACTTGCCCCGCATGCAGAGAATGAAGAGGAAATCGAGCGCGTACTGGACGAATTCGCCGACCGCCGCTGGCAGTCCG
ACGAACGTTATGCCGAAGCCTATATCCACAGCAAAAGCCGCAAACACGGCTCATTGCGGCTGAAACAGGCTTTGGCGCAA
AAGGGCGTGGACGAAGAAACCGTGCGCGCCTTCCTACCCGACCGCGACAACGAATTGGCTTCCGCCGTAGAAGTGGTGCG
CAAAAAATTCAAACGCCCGCCCGCCGACTATGCCGAAAAACTCAAACAGATGCGCTTTTTGGCTTATCGCGGCTTCGACG
GCGACACTATTCAGACGGCCTTAAGGCAGGCCTGGACGGAAGGAGAATAG

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A378TWL7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

72.297

99.329

0.718

Multiple sequence alignment