Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   DV389_RS02745 Genome accession   NZ_CP031250
Coordinates   553094..553747 (+) Length   217 a.a.
NCBI ID   WP_080358974.1    Uniprot ID   A0AAX3IPP3
Organism   Haemophilus influenzae strain M21384     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 548094..558747
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV389_RS02720 (DV389_02720) - 548501..549505 (-) 1005 WP_021034535.1 ornithine carbamoyltransferase -
  DV389_RS02725 (DV389_02725) - 549921..550739 (+) 819 WP_111688822.1 Cof-type HAD-IIB family hydrolase -
  DV389_RS02730 (DV389_02730) crcB 550739..551125 (+) 387 WP_021034533.1 fluoride efflux transporter CrcB -
  DV389_RS02735 (DV389_02735) recX 551122..551580 (-) 459 WP_114893052.1 recombination regulator RecX -
  DV389_RS02740 (DV389_02740) recA 551658..552722 (-) 1065 WP_110430958.1 recombinase RecA Machinery gene
  DV389_RS02745 (DV389_02745) sxy/tfoX 553094..553747 (+) 654 WP_080358974.1 DNA transformation protein TfoX Regulator

Sequence

Protein


Download         Length: 217 a.a.        Molecular weight: 25161.67 Da        Isoelectric Point: 9.7937

>NTDB_id=304944 DV389_RS02745 WP_080358974.1 553094..553747(+) (sxy/tfoX) [Haemophilus influenzae strain M21384]
MNIKDGHIDKVCSLLDLLVGNVTFKNLFTGYGLFHKEETMFAIWQNKKLYLRGEDELATQLIKLGCEPFTTNELNKRFVL
SQYYALTEQVLRNNMLCRKLIILSIKQIIEQKLECTLRKLNRLKDLPNLTIKHERALIKVGITDVMMLREIGAENALVEL
KKNGSGATLDFYWKLVCALQNKNSQMLSQAEKERLLKKLNEVLRKNGLKGYRKLDDE

Nucleotide


Download         Length: 654 bp        

>NTDB_id=304944 DV389_RS02745 WP_080358974.1 553094..553747(+) (sxy/tfoX) [Haemophilus influenzae strain M21384]
ATGAATATAAAGGATGGGCATATAGATAAAGTTTGCTCTTTGCTAGACCTGTTAGTAGGAAATGTTACCTTTAAAAATCT
TTTTACTGGTTACGGTTTGTTTCACAAGGAAGAGACAATGTTTGCCATCTGGCAAAATAAAAAGCTTTATTTACGAGGTG
AAGATGAGCTTGCAACTCAATTAATAAAATTAGGTTGTGAACCTTTTACAACGAATGAATTGAATAAACGGTTTGTGCTT
TCACAATATTATGCACTTACTGAACAGGTTTTACGTAATAATATGTTATGTAGAAAATTGATTATTCTTTCTATTAAGCA
GATTATTGAGCAGAAGCTAGAATGTACGTTAAGAAAGTTAAATCGATTAAAGGATTTACCCAATTTAACGATTAAACACG
AAAGAGCTTTAATAAAAGTTGGTATTACAGATGTTATGATGCTAAGAGAAATTGGTGCAGAAAATGCATTGGTGGAATTA
AAGAAAAATGGCAGTGGTGCTACGCTTGATTTTTATTGGAAGTTAGTATGTGCTTTGCAAAATAAAAATAGTCAGATGTT
AAGTCAAGCTGAAAAAGAGCGTTTATTGAAGAAATTAAACGAAGTTTTGAGAAAAAATGGCTTGAAAGGCTATAGAAAAT
TAGATGATGAATAA

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(19-107)

TfoX C-terminal domain (TfoX_C)

(121-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Haemophilus influenzae Rd KW20

91.705

100

0.917

Multiple sequence alignment