Detailed information NTG0304869

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: DV130_RS09265
• Genome accession: NZ_CP031248
• Coordinates: 1727188..1727649 (+)
• Length: 153 a.a.
• NCBI ID: WP_050072687.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain M26365
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1722188..1732649

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DV130_RS09230	-	1722683..1723741 (+)	1059	WP_000649470.1	zinc-dependent alcohol dehydrogenase family protein	-
DV130_RS09235	-	1723892..1724257 (+)	366	WP_000286415.1	DUF1033 family protein	-
DV130_RS09240	comGA/cglA/cilD	1724333..1725274 (+)	942	WP_000249571.1	competence type IV pilus ATPase ComGA	Machinery gene
DV130_RS09245	comGB/cglB	1725222..1726238 (+)	1017	WP_078130847.1	competence type IV pilus assembly protein ComGB	Machinery gene
DV130_RS09250	comGC/cglC	1726240..1726563 (+)	324	WP_000738628.1	comG operon protein ComGC	Machinery gene
DV130_RS09255	comGD/cglD	1726526..1726960 (+)	435	WP_033606693.1	competence type IV pilus minor pilin ComGD	Machinery gene
DV130_RS09260	comGE/cglE	1726923..1727225 (+)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
DV130_RS09265	comGF/cglF	1727188..1727649 (+)	462	WP_050072687.1	competence type IV pilus minor pilin ComGF	Machinery gene
DV130_RS09270	comGG/cglG	1727627..1728073 (+)	447	WP_050072685.1	competence type IV pilus minor pilin ComGG	Machinery gene
DV130_RS09275	-	1728176..1728770 (+)	595	Protein_1759	methyltransferase domain-containing protein	-
DV130_RS09280	comYH	1728831..1729784 (+)	954	WP_050072683.1	class I SAM-dependent methyltransferase	Machinery gene
DV130_RS09285	-	1729835..1731025 (+)	1191	WP_000167769.1	acetate/propionate family kinase	-
DV130_RS12790	-	1731026..1731157 (+)	132	WP_000768904.1	hypothetical protein	-
DV130_RS09290	rnpA	1731174..1731545 (+)	372	WP_000739244.1	ribonuclease P protein component	-
DV130_RS09295	-	1731520..1732344 (+)	825	WP_201418501.1	membrane protein insertase YidC	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17849.37 Da
• Isoelectric Point: 6.4832

>NTDB_id=304869 DV130_RS09265 WP_050072687.1 1727188..1727649(+) (comGF/cglF) [Streptococcus pneumoniae strain M26365]
MVQNSCWQSKSHKVKAFTLLESLIALIVISGGLLLFQAMSQLLISEVRYQQQSEQKEWLLFVDQLEAELDRSQFEKVEGN
RLYMKQDGKDIAIGKSKSDDFRKTDASGRGYQPMVYGLKSVQITEDNQLVHFRFQFQKGLEREFIYRVEKEES

Nucleotide

• Length: 462 bp

>NTDB_id=304869 DV130_RS09265 WP_050072687.1 1727188..1727649(+) (comGF/cglF) [Streptococcus pneumoniae strain M26365]
ATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAAGGTCAAGGCTTTTACCTTGTTAGAATCCCTGATTGCCCTGAT
TGTCATCAGTGGGGGATTACTCCTTTTTCAAGCTATGAGTCAGCTCCTCATTTCAGAAGTTCGCTACCAGCAACAAAGCG
AGCAAAAGGAGTGGCTCTTGTTTGTGGACCAACTTGAGGCAGAATTAGATCGTTCGCAGTTCGAAAAAGTAGAAGGCAAT
CGCCTATACATGAAGCAAGATGGCAAGGACATCGCCATCGGTAAGTCAAAGTCAGACGATTTTCGTAAAACCGATGCTAG
TGGACGGGGGTATCAGCCTATGGTTTATGGCCTCAAATCAGTTCAGATTACAGAGGACAATCAACTGGTTCATTTTCGTT
TCCAGTTTCAAAAAGGCTTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAGAAGAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	94.771	100	0.948
comGF/cglF	Streptococcus pneumoniae D39	94.771	100	0.948
comGF/cglF	Streptococcus pneumoniae R6	94.771	100	0.948
comGF/cglF	Streptococcus pneumoniae TIGR4	94.771	100	0.948
comGF/cglF	Streptococcus mitis SK321	93.464	100	0.935
comGF/cglF	Streptococcus mitis NCTC 12261	92.157	100	0.922